X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=chimerapintailcommand.cpp;fp=chimerapintailcommand.cpp;h=805709937724b9c046f8e99e7b5434c2e5dabc49;hp=fca9f176d9e66c8452a8da5c451eba71ca76d6eb;hb=60928795782d8f8648ec373d6a96b53032a77429;hpb=cbbf2f185fc7289910bb69421095c1de024c5225 diff --git a/chimerapintailcommand.cpp b/chimerapintailcommand.cpp index fca9f17..8057099 100644 --- a/chimerapintailcommand.cpp +++ b/chimerapintailcommand.cpp @@ -726,11 +726,11 @@ int ChimeraPintailCommand::createProcesses(string outputFileName, string filenam processIDS.push_back(pid); //create map from line number to pid so you can append files in correct order later process++; }else if (pid == 0){ - num = driver(lines[process], outputFileName + toString(getpid()) + ".temp", filename, accnos + toString(getpid()) + ".temp"); + num = driver(lines[process], outputFileName + toString(m->mothurGetpid(process)) + ".temp", filename, accnos + toString(m->mothurGetpid(process)) + ".temp"); //pass numSeqs to parent ofstream out; - string tempFile = outputFileName + toString(getpid()) + ".num.temp"; + string tempFile = outputFileName + toString(m->mothurGetpid(process)) + ".num.temp"; m->openOutputFile(tempFile, out); out << num << endl; out.close();