X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=chimeraperseuscommand.h;h=b3d6ccf56858deb00435ace345826450f7d4cd9e;hp=fdece95e5c90b528c7fcc3d476a53f28d4ea7b3b;hb=3504e4e2feeb05aabb0c79aa42cb696522030924;hpb=367747fb506bf228d3b2d645868d275ba0714e90

diff --git a/chimeraperseuscommand.h b/chimeraperseuscommand.h
index fdece95..b3d6ccf 100644
--- a/chimeraperseuscommand.h
+++ b/chimeraperseuscommand.h
@@ -46,7 +46,7 @@ private:
 		linePair(int i, int j) : start(i), end(j) {}
 	};
 	
-	bool abort, hasName, hasCount;
+	bool abort, hasName, hasCount, dups;
 	string fastafile, groupfile, countfile, outputDir, namefile;
 	int processors, alignLength;
 	double cutoff, alpha, beta;