X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=chimeracheckcommand.h;h=8981a14ff5e6e7813ab54123fe3fa1c8b68a0bc4;hp=918b4e5e9bf8aa4a16a1e0ba0716e09753a29cea;hb=cf9987b67aa49777a4c91c2d21f96e58bf17aa82;hpb=0caf3fbabaa3ece404f8ce77f4c883dc5b1bf1dc

diff --git a/chimeracheckcommand.h b/chimeracheckcommand.h
index 918b4e5..8981a14 100644
--- a/chimeracheckcommand.h
+++ b/chimeracheckcommand.h
@@ -27,7 +27,9 @@ public:
 	vector<string> setParameters();
 	string getCommandName()			{ return "chimera.check";		}
 	string getCommandCategory()		{ return "Sequence Processing"; }
+	
 	string getHelpString();	
+    string getOutputPattern(string);	
 	string getCitation() { return "CHIMERA_CHECK version 2.7 written by Niels Larsen (http://wdcm.nig.ac.jp/RDP/docs/chimera_doc.html) \nhttp://www.mothur.org/wiki/Chimera.check"; }
 	string getDescription()		{ return "detect chimeric sequences"; }