X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=chimeracheckcommand.cpp;h=64ed9faa73e7cb72e5e307cc10e86f1a9bcfc195;hp=31a36f73c6d0339d775dd6a1a4efa8e523c0f14f;hb=0ac77545b7ad36dbd28c5388fb85e9156207c56d;hpb=82cb1bdd831b05cc79b921fc0930fbcebe2098e4 diff --git a/chimeracheckcommand.cpp b/chimeracheckcommand.cpp index 31a36f7..64ed9fa 100644 --- a/chimeracheckcommand.cpp +++ b/chimeracheckcommand.cpp @@ -38,7 +38,7 @@ string ChimeraCheckCommand::getHelpString(){ try { string helpString = ""; helpString += "The chimera.check command reads a fastafile and referencefile and outputs potentially chimeric sequences.\n"; - helpString += "This command was created using the algorythms described in CHIMERA_CHECK version 2.7 written by Niels Larsen. \n"; + helpString += "This command was created using the algorithms described in CHIMERA_CHECK version 2.7 written by Niels Larsen. \n"; helpString += "The chimera.check command parameters are fasta, reference, processors, ksize, increment, svg and name.\n"; helpString += "The fasta parameter allows you to enter the fasta file containing your potentially chimeric sequences, and is required unless you have a valid current fasta file. \n"; helpString += "You may enter multiple fasta files by separating their names with dashes. ie. fasta=abrecovery.fasta-amzon.fasta \n";