X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=bstick.cpp;h=67507a9967ef82effe923662298960ecf00618b8;hp=d064ebe107e5fbc90fa10015572e60c11f9e5f45;hb=050a3ff02473a3d4c0980964e1a9ebe52e55d6b8;hpb=74844a60d80c6dd06e3fb02ee9b928424f9019b0

diff --git a/bstick.cpp b/bstick.cpp
index d064ebe..67507a9 100644
--- a/bstick.cpp
+++ b/bstick.cpp
@@ -18,7 +18,7 @@ double BStick::invSum(int index, double numSpec)
 		sum += 1/(double)i;
 	return sum;
 }
-
+/***********************************************************************/
 RAbundVector BStick::getRAbundVector(SAbundVector* rank){
 		vector <int> rData;
 		int mr = 1;
@@ -26,7 +26,7 @@ RAbundVector BStick::getRAbundVector(SAbundVector* rank){
 		int ns = 0;
 		
 		for(int i = rank->size()-1; i > 0; i--) {
-			int cur = rank->get(i);
+			double cur = rank->get(i);
 			if(mr == 1 && cur > 0)
 				mr = i;
 			nb += cur;
@@ -68,7 +68,7 @@ EstOutput BStick::getValues(SAbundVector* rank){
 		data[2] = 1.031/sqrt(rdata.size());
 
 		/*m->mothurOut(critVal); m->mothurOutEndLine();
-		m->mothurOut("If D-Statistic is less than the critical value then the data fits the Broken Stick model w/ 95% confidence.\n\n");*/
+		m->mothurOut("If D-Statistic is less than the critical value then the data fits the Broken Stick model w/ 95% confidence.\n");*/
 		
 
 		if (isnan(data[0]) || isinf(data[0])) { data[0] = 0; }