X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=blastdb.hpp;h=50a8379b68ec89130b7df1892aab4538daa77a1e;hp=99a99879f427efd0ea068f125bbf8b1cd003e95e;hb=d1c97b8c04bb75faca1e76ffad60b37a4d789d3d;hpb=4e4d3cb3315fe25b40383c6f65cd6be23f58903d

diff --git a/blastdb.hpp b/blastdb.hpp
index 99a9987..50a8379 100644
--- a/blastdb.hpp
+++ b/blastdb.hpp
@@ -16,8 +16,8 @@
 class BlastDB : public Database {
 
 public:
-	BlastDB(string, float, float, float, float, string);
-	BlastDB(string);
+	BlastDB(string, float, float, float, float, string, int);
+	BlastDB(string, int);
 	~BlastDB();
 	
 	void generateDB();
@@ -26,12 +26,15 @@ public:
 	vector<int> findClosestMegaBlast(Sequence*, int, int);
 	
 private:
+	
+	string scrubName(string);
+	
 	string dbFileName;
 	string queryFileName;
 	string blastFileName;
 	string path;
 	
-	int count;
+	int count, threadID;
 	float gapOpen;
 	float gapExtend;
 	float match;