X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=blastalign.hpp;h=31688bd86d77386d384fef73bb9c3289e681ada3;hp=696c134375785698c1c15649fef4adc2df783a4a;hb=d1c97b8c04bb75faca1e76ffad60b37a4d789d3d;hpb=36a8526766106bce1412e530e99f9c699dd59105

diff --git a/blastalign.hpp b/blastalign.hpp
index 696c134..31688bd 100644
--- a/blastalign.hpp
+++ b/blastalign.hpp
@@ -1,3 +1,7 @@
+#ifndef BlastAlignment_H
+#define BlastAlignment_H
+
+
 /*
  *  blastalign.hpp
  *  
@@ -12,7 +16,7 @@
  */
  
 #include "mothur.h"
-#include "globaldata.hpp"
+
 
 class BlastAlignment : public Alignment {
 
@@ -20,6 +24,8 @@ public:
 	BlastAlignment(float, float, float, float);
 	~BlastAlignment();
 	void align(string, string);
+	void setMatrix(int){};
+	
 private:
 
 	string candidateFileName;
@@ -32,6 +38,9 @@ private:
 	float mismatch;
 	float gapOpen;
 	float gapExtend;
-	GlobalData* globaldata;
 };
 
+#endif
+
+
+