coverage.cpp

   1 /*
   2  *  coverage.cpp
   3  *  Mothur
   4  *
   5  *  Created by Pat Schloss on 4/22/09.
   6  *  Copyright 2009 Patrick D. Schloss. All rights reserved.
   7  *
   8  */
   9
  10 #include "coverage.h"
  11
  12 /***********************************************************************/
  13 EstOutput Coverage::getValues(SAbundVector* rank){
  14
  15         try {
  16                 data.resize(1,0);
  17
  18                 data[0] = 1. - rank->get(1) / (double)rank->getNumSeqs();
  19
  20                 return data;
  21         }
  22         catch(exception& e) {
  23                 m->errorOut(e, "Coverage", "getValues");
  24                 exit(1);
  25         }
  26 }
  27
  28
  29 /***********************************************************************/