From 3557eb364c40602a2f2d3f4c2a68edd6ee00b632 Mon Sep 17 00:00:00 2001 From: Don Armstrong Date: Fri, 26 Oct 2007 20:26:45 +0000 Subject: [PATCH] * Rename do_it_all; document function2gene more clearly git-svn-id: file:///srv/svn/function2gene/trunk@13 a0738b58-4706-0410-8799-fb830574a030 --- bin/{do_it_all => function2gene} | 9 ++++++--- 1 file changed, 6 insertions(+), 3 deletions(-) rename bin/{do_it_all => function2gene} (96%) diff --git a/bin/do_it_all b/bin/function2gene similarity index 96% rename from bin/do_it_all rename to bin/function2gene index 9a681ec..922deac 100755 --- a/bin/do_it_all +++ b/bin/function2gene @@ -1,5 +1,5 @@ #! /usr/bin/perl -# do_it_all, is part of the gene search suite and is released +# function2gene, is part of the function2gene suite and is released # under the terms of the GPL version 2, or any later version, at your # option. See the file README and COPYING for more information. # Copyright 2007 by Don Armstrong . @@ -16,12 +16,12 @@ use Storable; =head1 NAME - do_it_all - Call out to each of the search modules to search for + function2gene - Call out to each of the search modules to search for each of the terms =head1 SYNOPSIS - do_it_all --keywords keywords.txt --results gene_search_results + function2gene --keywords keywords.txt --results gene_search_results Options: --keywords newline delineated list of keywords to search for @@ -74,6 +74,9 @@ Display this manual. =head1 EXAMPLES + # Search all databases for transferrin + echo 'transferrin' > keywords.txt + function2gene --keywords keywords.txt --results keyword_results =cut -- 2.39.2