function2gene.git
11 years agoadd a readme
Don Armstrong [Sun, 4 Nov 2007 04:47:05 +0000 (04:47 +0000)]
add a readme

git-svn-id: file:///srv/svn/function2gene/trunk@17 a0738b58-4706-0410-8799-fb830574a030

11 years agoremove useless lib directory
Don Armstrong [Sat, 27 Oct 2007 00:15:10 +0000 (00:15 +0000)]
remove useless lib directory

git-svn-id: file:///srv/svn/function2gene/trunk@16 a0738b58-4706-0410-8799-fb830574a030

11 years ago * Fix genecard and harvester parsers
Don Armstrong [Sat, 27 Oct 2007 00:14:42 +0000 (00:14 +0000)]
 * Fix genecard and harvester parsers
 * Add headers for results_to_table
 * Call results_to_table in function2gene

git-svn-id: file:///srv/svn/function2gene/trunk@15 a0738b58-4706-0410-8799-fb830574a030

11 years agoAdd results to table; modify the search parssers to work better. Fix error in get_ncb...
Don Armstrong [Fri, 26 Oct 2007 21:40:13 +0000 (21:40 +0000)]
Add results to table; modify the search parssers to work better. Fix error in get_ncbi_results

git-svn-id: file:///srv/svn/function2gene/trunk@14 a0738b58-4706-0410-8799-fb830574a030

11 years ago * Rename do_it_all; document function2gene more clearly
Don Armstrong [Fri, 26 Oct 2007 20:26:45 +0000 (20:26 +0000)]
 * Rename do_it_all; document function2gene more clearly

git-svn-id: file:///srv/svn/function2gene/trunk@13 a0738b58-4706-0410-8799-fb830574a030

11 years agoupdate combine results
Don Armstrong [Fri, 26 Oct 2007 01:07:43 +0000 (01:07 +0000)]
update combine results

git-svn-id: file:///srv/svn/function2gene/trunk@12 a0738b58-4706-0410-8799-fb830574a030

11 years agoupdate everything again
Don Armstrong [Tue, 28 Aug 2007 02:54:48 +0000 (02:54 +0000)]
update everything again

git-svn-id: file:///srv/svn/function2gene/trunk@11 a0738b58-4706-0410-8799-fb830574a030

11 years agohandle command failure; fix write_command_to_file
Don Armstrong [Tue, 28 Aug 2007 01:02:26 +0000 (01:02 +0000)]
handle command failure; fix write_command_to_file

git-svn-id: file:///srv/svn/function2gene/trunk@10 a0738b58-4706-0410-8799-fb830574a030

11 years agoupdate get harvester results for new site
Don Armstrong [Tue, 28 Aug 2007 01:01:57 +0000 (01:01 +0000)]
update get harvester results for new site

git-svn-id: file:///srv/svn/function2gene/trunk@9 a0738b58-4706-0410-8799-fb830574a030

11 years agoupdate copyright information
Don Armstrong [Tue, 28 Aug 2007 01:01:28 +0000 (01:01 +0000)]
update copyright information

git-svn-id: file:///srv/svn/function2gene/trunk@8 a0738b58-4706-0410-8799-fb830574a030

11 years ago * Update ncbi results to handle the new ncbi output format
Don Armstrong [Tue, 28 Aug 2007 01:00:57 +0000 (01:00 +0000)]
 * Update ncbi results to handle the new ncbi output format

git-svn-id: file:///srv/svn/function2gene/trunk@7 a0738b58-4706-0410-8799-fb830574a030

11 years agomove get_ncbi_results
Don Armstrong [Mon, 27 Aug 2007 22:29:47 +0000 (22:29 +0000)]
move get_ncbi_results

git-svn-id: file:///srv/svn/function2gene/trunk@6 a0738b58-4706-0410-8799-fb830574a030

11 years agoupdate search program with options for do_it_all; implement calls to subsideary scripts
Don Armstrong [Mon, 27 Aug 2007 22:29:21 +0000 (22:29 +0000)]
update search program with options for do_it_all; implement calls to subsideary scripts

git-svn-id: file:///srv/svn/function2gene/trunk@5 a0738b58-4706-0410-8799-fb830574a030

11 years agoadd threads implementation to actually handle doing the useful stuff
Don Armstrong [Sat, 25 Aug 2007 02:23:41 +0000 (02:23 +0000)]
add threads implementation to actually handle doing the useful stuff

git-svn-id: file:///srv/svn/function2gene/trunk@4 a0738b58-4706-0410-8799-fb830574a030

11 years agoadd do it all script to call other modules
Don Armstrong [Fri, 24 Aug 2007 09:12:28 +0000 (09:12 +0000)]
add do it all script to call other modules

git-svn-id: file:///srv/svn/function2gene/trunk@3 a0738b58-4706-0410-8799-fb830574a030

12 years agoadd bin files for search routines
Don Armstrong [Sat, 12 May 2007 05:23:43 +0000 (05:23 +0000)]
add bin files for search routines

git-svn-id: file:///srv/svn/function2gene/trunk@2 a0738b58-4706-0410-8799-fb830574a030

13 years agoadd 313 sample
Don Armstrong [Thu, 5 Jan 2006 06:05:12 +0000 (06:05 +0000)]
add 313 sample

git-svn-id: file:///srv/svn/function2gene/trunk@1 a0738b58-4706-0410-8799-fb830574a030