From: Don Armstrong Date: Tue, 4 Dec 2007 02:04:04 +0000 (+0000) Subject: modify readme some more; add Makefile.PL X-Git-Url: https://git.donarmstrong.com/?p=function2gene.git;a=commitdiff_plain;h=ad04f7561c9fdbc3247cc7748f14a5aa30bed88e modify readme some more; add Makefile.PL git-svn-id: file:///srv/svn/function2gene/trunk@18 a0738b58-4706-0410-8799-fb830574a030 --- diff --git a/Makefile.PL b/Makefile.PL new file mode 100644 index 0000000..7a01360 --- /dev/null +++ b/Makefile.PL @@ -0,0 +1,24 @@ +#!/usr/bin/perl + +use ExtUtils::MakeMaker; + +WriteMakefile(NAME => 'Function2Gene', + DISTNAME => 'Function2Gene', + VERSION => 0.01, + PREREQ_FATAL => 1, + PREREQ_PM => {'HTML::TreeBuilder' => 0, + 'HTML::ElementTable' => 0, + 'XML::Parser::Expat' => 0, + 'Thread::Queue' => 0, + }, + EXE_FILES => [map {qq(bin/$_)} + 'combine_results', + 'function2gene', + 'get_harvester_results', + 'parse_harvester_results', + 'get_ncbi_results', + 'parse_ncbi_results', + 'get_genecard_results', + 'parse_genecard_results', + ], + ); diff --git a/README b/README index d58ea51..9f589a5 100644 --- a/README +++ b/README @@ -10,7 +10,9 @@ XML::Parser::Expat Thread::Queue these requirements are most easily satisfied on a Debian system (or -other unix systems) but it is possible to use windows as well. +other unix systems) but it is possible to use windows system as well. + +On Debian machines: aptitude install wget perl libwww-perl libxml-parser-perl dh-make-perl; dh-make-perl --cpan --build --install Thread::Queue; @@ -21,6 +23,8 @@ will want libhtml-parser-perl instead of libwww-perl.] For other systems, installing the modules using CPAN may be the best approach. + + USAGE All of the programs are located within a bin directory. For a