From: Don Armstrong <don@donarmstrong.com>
Date: Wed, 27 Feb 2008 22:36:27 +0000 (+0000)
Subject:  * Default back to ncbi genecards and harvester, but indicate that ensembl and unipro... 
X-Git-Url: https://git.donarmstrong.com/?p=function2gene.git;a=commitdiff_plain;h=757a79394267bc9c18f0eebeb7016cf2e07f0c8d

 * Default back to ncbi genecards and harvester, but indicate that ensembl and uniprot are also supported


git-svn-id: file:///srv/svn/function2gene/trunk@37 a0738b58-4706-0410-8799-fb830574a030
---

diff --git a/bin/function2gene b/bin/function2gene
index 66b02bb..962be18 100755
--- a/bin/function2gene
+++ b/bin/function2gene
@@ -53,8 +53,8 @@ the system
 =item B<--database>
 
 Databases to search, can be specified multiple times. [Defaults to
-NCBI, GeneCards and Harvester, the only currently supported
-databases.]
+NCBI, GeneCards and Harvester, but ensembl and uniprot are also
+supported currently.]
 
 =item B<--restart-at>
 
@@ -142,7 +142,7 @@ elsif (not -d $options{results} or not -w $options{results}) {
 pod2usage($ERRORS) if length $ERRORS;
 
 if (not @{$options{databases}}) {
-     $options{databases} = [qw(ncbi genecard harvester ensembl uniprot)]
+     $options{databases} = [qw(ncbi genecard harvester)]
 }
 
 $DEBUG = $options{debug};
@@ -297,6 +297,9 @@ for my $keyword (@{$state{keywords}}) {
      }
 }
 
+$SIG{INT} = sub {
+     save_state(\%state);
+};
 
 for my $state (qw(get parse)) {
      my %databases;