update search program with options for do_it_all; implement calls to subsideary scripts

[function2gene.git] / bin / get_ncbi_xml_results

diff --git a/bin/get_ncbi_xml_results b/bin/get_ncbi_xml_results
index 3ee477861abb0ca8032c60eaf93e0df36977916e..c1043562a3bb50db7244274673c465caba3e7eb6 100755 (executable)
--- a/bin/get_ncbi_xml_results
+++ b/bin/get_ncbi_xml_results
@@ -84,7 +84,7 @@ my %options = (debug    => 0,
               format   => 'xml',
               database => 'gene',
               dir      => '.',
-              name     => '${search}_results.$format',
+              name     => 'ncbi_${search}_results.$format',
               terms    => '-',
               pubmed_site => 'http://www.ncbi.nlm.nih.gov',
               pubmed_search_url  => '/entrez/query.fcgi?db=gene&cmd=search&term=12q24*+AND+homo[Orgn]&doptcmdl=Brief&dispmax=1000',