]> git.donarmstrong.com Git - fastq-tools.git/commitdiff
projects / fastq-tools.git / commitdiff
? search:
summary | shortlog | log | commit | commitdiff | tree
raw | patch | inline | side by side (parent: c2d5b03)
HTML output for man pages.
authorDaniel Jones <dcjones@cs.washington.edu>
Mon, 10 Dec 2012 04:22:21 +0000 (20:22 -0800)
committerDaniel Jones <dcjones@cs.washington.edu>
Mon, 10 Dec 2012 04:22:21 +0000 (20:22 -0800)
TODO patch | blob | history
doc/Makefile.am patch | blob | history
doc/fastq-uniq.1 patch | blob | history

diff --git a/TODO b/TODO
index 7b06a07dadfa357ac55c44b26b6d5d22bea1fa84..59cc3b1752eadd385e8858281d16aafe65f0285f 100644 (file)
--- a/TODO
+++ b/TODO
@@ -1,12 +1,4 @@
 
-Rename hash.h/c to hash_table.h/c.
-
-Seperate murmurhash into it's own file: hash.h/hash.c.
-
-Document fastq-sort.
-
-More comparison functions for fastq-sort.
-
 Link against quip so we can run these tools on quip/fastq/bam/sam with one
 interface.
 
diff --git a/doc/Makefile.am b/doc/Makefile.am
index 16f345b4a47140d13f8b576789dae2ba37588ebb..17a098204ec8768e41a1da227645c582c166e0c2 100644 (file)
--- a/doc/Makefile.am
+++ b/doc/Makefile.am
@@ -1,4 +1,9 @@
 
 dist_man_MANS = fastq-grep.1 fastq-kmers.1 fastq-match.1 fastq-uniq.1 fastq-sample.1 fastq-sort.1
 
+.1.html :
+       groff -man -Thtml < $< \
+               | perl -pe 's/<head>/<head>\n<link rel="stylesheet" href="stylesheets\/man.css">/' \
+               > $@
 
+html-local : fastq-grep.html fastq-kmers.html fastq-match.html fastq-uniq.html fastq-sample.html fastq-sort.html
diff --git a/doc/fastq-uniq.1 b/doc/fastq-uniq.1
index e3b2923193435555eb25d1915eb86a5f856c8d18..62ced3720faf0bbfc014a2892134f0d77533e264 100644 (file)
--- a/doc/fastq-uniq.1
+++ b/doc/fastq-uniq.1
@@ -1,7 +1,7 @@
 .TH FASTQ-UNIQ 1
 
 .SH NAME
-fastq-uniq - print sequences matching a pattern
+fastq-uniq - filter out reads with identical sequences
 
 .SH SYNOPSIS
 .B fastq-uniq [OPTION]... PATTERN [FILE]...
Fastq configuration