.TH FASTQ-QSCORE 1

.SH NAME
fastq-qscore - detect a files quality score encoding

.SH SYNOPSIS
.B fastq-qscore [OPTION]... [FILE]...

.SH DESCRIPTION
The program looks inspects a FASTQ file to try to determine the quality score
encoding used.  Specifically, it will classify a file as one of:

Sanger/Phred+33
.br
Illumina 1.8/Phred+33
.br
Illumina 1.5/Phred+64
.br
Illumina 1.3/Phred+64
.br
Solexa/Solexa+64

The program is modeled roughly after the Unix file command, which inspects files
to determine their type.


.SH OPTIONS
.TP
\fB\-h\fR, \fB\-\-help\fR
Output a help message and exit.
.TP
\fB\-V\fR, \fB\-\-version\fR
Output version information and exit.


.SH AUTHOR
Written by Daniel C. Jones <dcjones@cs.washington.edu>