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git.donarmstrong.com Git - cran2deb.git/log
moeller [Sat, 12 Feb 2011 10:23:23 +0000 (10:23 +0000)]
netcdf has a newer soname.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@353
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moeller [Fri, 11 Feb 2011 19:52:49 +0000 (19:52 +0000)]
Fixed depends for Rgraphviz (missing dot appliation) and flowClust (missed GSL).
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@352
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moeller [Fri, 11 Feb 2011 19:38:06 +0000 (19:38 +0000)]
Adjusted imagemagick dependencies, e.g. for EBImage.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@351
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moeller [Fri, 11 Feb 2011 18:38:36 +0000 (18:38 +0000)]
Helped documentation on adding license info.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@350
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moeller [Fri, 11 Feb 2011 18:08:59 +0000 (18:08 +0000)]
Adding propmpt that was lost with Tony's fix.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@349
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moeller [Fri, 11 Feb 2011 18:08:07 +0000 (18:08 +0000)]
Applying Tony's fix from depends to license.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@348
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moeller [Fri, 11 Feb 2011 17:30:33 +0000 (17:30 +0000)]
Adding description of dealing with database to README.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@347
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moeller [Fri, 11 Feb 2011 17:03:58 +0000 (17:03 +0000)]
Fixed dependencies for Rgraphviz and maybe also for
the one or other package depending on imagemagick's
libraries.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@346
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moeller [Thu, 10 Feb 2011 17:52:11 +0000 (17:52 +0000)]
Rgraphviz should compile with this information.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@345
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moeller [Wed, 9 Feb 2011 22:37:30 +0000 (22:37 +0000)]
The magick9 files are not available for me.
The magic++ libraries drag with them quite a bit,
but at least for EBImage this seems correct.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@344
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moeller [Wed, 9 Feb 2011 09:53:47 +0000 (09:53 +0000)]
Working with BioConductor.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@343
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moeller [Tue, 8 Feb 2011 18:16:12 +0000 (18:16 +0000)]
Fixes to BASH version of exec/update,
update_cache allows for multiple mirrors.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@342
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moeller [Tue, 8 Feb 2011 17:29:17 +0000 (17:29 +0000)]
Knowing how to interpret rforge and omegahat, too.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@341
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moeller [Tue, 8 Feb 2011 15:50:04 +0000 (15:50 +0000)]
Syntax correction.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@340
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moeller [Tue, 8 Feb 2011 15:49:34 +0000 (15:49 +0000)]
From Plan 9 shell to BASH. Works.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@339
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moeller [Tue, 8 Feb 2011 15:48:47 +0000 (15:48 +0000)]
Removed irrelavant PDF "don't compress" instruction.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@338
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moeller [Tue, 8 Feb 2011 15:42:08 +0000 (15:42 +0000)]
UNIX style has a newline at the end.
A search for the application of this
exec/which_system seems to suggest
that the newline is fine.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@337
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moeller [Tue, 8 Feb 2011 14:24:19 +0000 (14:24 +0000)]
Transformed Plan 9 shell script into BASH,
preparing to also transform it into an R
script.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@336
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moeller [Tue, 8 Feb 2011 14:02:55 +0000 (14:02 +0000)]
Added code for a nicely working Debian package.
This is meant to help ourselves for the development
of cran2deb. As much as possible for the maintenance
of a cran2deb installation should go in there
(and into the README).
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@335
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moeller [Tue, 8 Feb 2011 13:39:03 +0000 (13:39 +0000)]
Many debug statements were added (not shown by default). They are likely
to be removed soon. That area is currently been scrutinised for a better
interaction with the human operator for the manual inspection of licenses
the feeding back of such "editorial decisions" (Dirk).
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@334
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moeller [Tue, 8 Feb 2011 12:14:54 +0000 (12:14 +0000)]
Added (defaulted off) more debug messages.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@333
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moeller [Tue, 8 Feb 2011 12:08:17 +0000 (12:08 +0000)]
Some increased verbosity for the update cache routine.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@332
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moeller [Tue, 8 Feb 2011 12:01:58 +0000 (12:01 +0000)]
More messages in the build script. Some
improved clarity of the code. Change of
semantics: the system for the very moment
does not fail upon the failure of the
packaging process of a single package.
This will become a paramter to set with
a very soon further commit.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@331
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moeller [Tue, 8 Feb 2011 11:48:04 +0000 (11:48 +0000)]
Added debug statements. Off by default.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@330
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moeller [Tue, 8 Feb 2011 11:41:50 +0000 (11:41 +0000)]
Improving compliance to Debian policy with the
specification of the Homepage.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@329
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moeller [Tue, 8 Feb 2011 11:40:17 +0000 (11:40 +0000)]
Only now added the reference hookdir to the
repository.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@328
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moeller [Tue, 8 Feb 2011 11:38:31 +0000 (11:38 +0000)]
The README was enhanced in many ways to direct the
anticipated additional helping hands this effort
is hoping to attract. I was very glad to have
experienced the original version of it and it
certainly will be appreciated by those following
us.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@327
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moeller [Tue, 8 Feb 2011 11:35:19 +0000 (11:35 +0000)]
The hook directory for i386 and the hook itself.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@326
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moeller [Tue, 8 Feb 2011 11:34:20 +0000 (11:34 +0000)]
The hook directory may collect scripts to
update the build directory when triggered
by various events.
We needed it to perform an "apt-get update"
to learn about the new packages (or latest
version of those) that cran2deb has just
crafted and uploaded.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@325
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moeller [Tue, 8 Feb 2011 11:30:04 +0000 (11:30 +0000)]
Series of improved error messages or debug statements,
added by Tony or myself while learning about the interpretation
of various errors.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@324
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moeller [Tue, 8 Feb 2011 11:24:13 +0000 (11:24 +0000)]
Bug occurring only for non-interactive shell. Fixed by Tony.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@323
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moeller [Tue, 8 Feb 2011 11:08:27 +0000 (11:08 +0000)]
Circumvented bug in hwriter that cannot write empty tables. Using getopt package to read arguments. The cran2deb shell script needed to be adapted for it and the
DESCRIPTION now mentions also getopt.
(little)r and getopt together as so strong, that in the (a bit) longer run I also see it substitute what today is implemented in the plan 9 shell, if you do not mind.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@322
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blundellc [Sat, 31 Jul 2010 23:14:18 +0000 (23:14 +0000)]
double-comma typo
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@321
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blundellc [Sat, 31 Jul 2010 23:06:34 +0000 (23:06 +0000)]
rename double_build -> split_build
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@320
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blundellc [Sat, 31 Jul 2010 22:57:04 +0000 (22:57 +0000)]
split view of debian_dependency and blacklist_packages by system; preparation for ubuntu building
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@319
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blundellc [Sat, 31 Jul 2010 22:31:59 +0000 (22:31 +0000)]
initial commit of build all-at-once code.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@318
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blundellc [Sat, 31 Jul 2010 22:26:47 +0000 (22:26 +0000)]
sync. data with host
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@317
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edd [Thu, 10 Jun 2010 14:54:30 +0000 (14:54 +0000)]
also treat doMPI as Rmpi and npRmpi and add --no-test-load
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@316
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edd [Thu, 10 Jun 2010 14:50:24 +0000 (14:50 +0000)]
the Rmpi and npRmpi packages fail at the end of R CMD INSTALL because the test load of the package fails (outside of an MPI context)
so added a crude hack that when the debian/rules is written, 'extraInstallArgs="--no-test-load"' is added (as I do for Debian's Rmpi package)
conceivably we may want to generalise this one day as we do for lintian tests and patches and either look at at directory or a db table
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@315
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blundellc [Sun, 6 Jun 2010 19:24:56 +0000 (19:24 +0000)]
reprepro version before the massacre
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@314
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blundellc [Sun, 6 Jun 2010 19:01:35 +0000 (19:01 +0000)]
update TODO
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@313
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blundellc [Sun, 6 Jun 2010 19:00:54 +0000 (19:00 +0000)]
rip bundles
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@312
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blundellc [Sun, 6 Jun 2010 18:50:23 +0000 (18:50 +0000)]
sudo to cran2deb user prior to commands if not already user
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@311
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blundellc [Sun, 6 Jun 2010 18:17:14 +0000 (18:17 +0000)]
update todo
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@310
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edd [Sun, 6 Jun 2010 17:57:56 +0000 (17:57 +0000)]
park another bundle check in the closet
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@309
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blundellc [Sun, 6 Jun 2010 17:38:28 +0000 (17:38 +0000)]
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@308
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edd [Sat, 29 May 2010 14:48:34 +0000 (14:48 +0000)]
use notice() not fail() if package is blacklisted
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@307
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edd [Sat, 29 May 2010 14:32:50 +0000 (14:32 +0000)]
db_time_format no longer likes %Z, so removed
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@306
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edd [Sat, 29 May 2010 14:12:47 +0000 (14:12 +0000)]
make r_bundle_of() a null-op as there are no more bundles in R 2.11.0
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@305
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edd [Sat, 29 May 2010 11:24:12 +0000 (11:24 +0000)]
current lintian version is 3.8.4
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@304
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edd [Sat, 29 May 2010 11:23:15 +0000 (11:23 +0000)]
switch to reprepro instead of dput + mini-dinstall -- this works for i386 but we need to rearchitect things for amd64
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@303
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blundellc [Sun, 23 May 2010 11:54:03 +0000 (11:54 +0000)]
sync with current cran2deb
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@302
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blundellc [Sun, 11 Apr 2010 18:05:55 +0000 (18:05 +0000)]
add option to not cleanup (debug) packages to build. update aliases/hashes from db.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@301
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edd [Mon, 25 Jan 2010 18:47:17 +0000 (18:47 +0000)]
fix another brown bag bug / typo for good measure
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@300
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edd [Mon, 25 Jan 2010 18:43:46 +0000 (18:43 +0000)]
fix brown bag bug / typo
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@299
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edd [Mon, 25 Jan 2010 17:54:27 +0000 (17:54 +0000)]
update_cache reverted to prior version (which calls get_base_pkgs)
get_base_pkgs now restricted to base package leaving Recommended packages for us to build
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@298
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edd [Mon, 25 Jan 2010 15:19:46 +0000 (15:19 +0000)]
set base_pkgs to empty string in exec/update_cache to build them all as there is no longer a reason not to
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@297
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edd [Sat, 23 Jan 2010 16:54:00 +0000 (16:54 +0000)]
added simply 'group by' on explanation for db_blacklist_reason
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@296
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edd [Sun, 3 Jan 2010 15:29:28 +0000 (15:29 +0000)]
expand max_log_len (that was a pending commit I forgot to check in weeks ago)
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@295
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edd [Wed, 9 Dec 2009 03:02:02 +0000 (03:02 +0000)]
added two Encoding overrides which helps for packages by Jens when he writes his names as Umlaut-a
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@294
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edd [Sun, 6 Dec 2009 05:06:11 +0000 (05:06 +0000)]
one correction about function names -- we now have lintian support
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@293
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edd [Sun, 6 Dec 2009 04:57:51 +0000 (04:57 +0000)]
trying to a lintian layer similar to patches as we cannot patch inside debian/
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@292
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edd [Sat, 5 Dec 2009 20:44:32 +0000 (20:44 +0000)]
some debugging statements added and currently commented-out
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@291
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edd [Sat, 5 Dec 2009 16:44:03 +0000 (16:44 +0000)]
bah, copy and paste error
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@290
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edd [Sat, 5 Dec 2009 16:42:50 +0000 (16:42 +0000)]
add a missing quote() around sql statement part
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@289
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edd [Sat, 5 Dec 2009 16:38:38 +0000 (16:38 +0000)]
try a try() around a killer sql statement
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@288
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edd [Sat, 5 Dec 2009 16:32:48 +0000 (16:32 +0000)]
usage message was missing word 'build'
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@287
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blundellc [Fri, 27 Nov 2009 22:21:37 +0000 (22:21 +0000)]
work around calloc error in R 2.10
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@286
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blundellc [Thu, 19 Nov 2009 21:37:22 +0000 (21:37 +0000)]
force build in build_all
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@285
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blundellc [Thu, 19 Nov 2009 21:34:50 +0000 (21:34 +0000)]
add build_all script
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@284
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blundellc [Fri, 23 Oct 2009 20:38:03 +0000 (20:38 +0000)]
too much matlab.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@283
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blundellc [Fri, 23 Oct 2009 20:37:25 +0000 (20:37 +0000)]
add Author and Maintainer fields to description
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@282
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blundellc [Fri, 23 Oct 2009 20:07:50 +0000 (20:07 +0000)]
force RGtk2 to depend upon glade. bug reported by Balazs Barany. thanks.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@281
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blundellc [Sun, 4 Oct 2009 17:21:41 +0000 (17:21 +0000)]
www redirect to homepage
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@280
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blundellc [Sun, 13 Sep 2009 17:52:57 +0000 (17:52 +0000)]
speeling
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@279
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blundellc [Sun, 13 Sep 2009 16:36:05 +0000 (16:36 +0000)]
brand it a bit
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@278
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blundellc [Sun, 13 Sep 2009 16:32:24 +0000 (16:32 +0000)]
update dependencies
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@277
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blundellc [Sun, 13 Sep 2009 16:30:04 +0000 (16:30 +0000)]
generate cran2deb status web pages
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@276
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blundellc [Thu, 10 Sep 2009 18:01:41 +0000 (18:01 +0000)]
update TODO
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@275
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blundellc [Thu, 10 Sep 2009 17:42:29 +0000 (17:42 +0000)]
backup license hashes. this is not optimal wrt accountability but should suffice for now.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@274
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edd [Mon, 7 Sep 2009 23:58:07 +0000 (23:58 +0000)]
Standards-Version increased to 3.8.3
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@273
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blundellc [Wed, 19 Aug 2009 22:15:39 +0000 (22:15 +0000)]
update sysreq, aliases, and forces from db.
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@272
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edd [Tue, 18 Aug 2009 19:03:52 +0000 (19:03 +0000)]
Standards-Version: now 3.8.2
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@271
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blundellc [Tue, 18 Aug 2009 18:26:24 +0000 (18:26 +0000)]
drop empty sysreqs
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@270
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edd [Fri, 3 Jul 2009 19:21:33 +0000 (19:21 +0000)]
small updates, new URL for apt-get
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@269
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edd [Thu, 2 Jul 2009 03:07:36 +0000 (03:07 +0000)]
added other category
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@268
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edd [Wed, 1 Jul 2009 02:15:38 +0000 (02:15 +0000)]
a few minor edits
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@267
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blundellc [Tue, 30 Jun 2009 19:40:21 +0000 (19:40 +0000)]
more license details
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@266
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blundellc [Tue, 30 Jun 2009 16:20:46 +0000 (16:20 +0000)]
split slides; talk about license hell
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@265
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edd [Tue, 30 Jun 2009 02:21:52 +0000 (02:21 +0000)]
added another final bulletpoint
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@264
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edd [Tue, 30 Jun 2009 02:08:56 +0000 (02:08 +0000)]
and another round of updates
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@263
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edd [Tue, 30 Jun 2009 01:26:50 +0000 (01:26 +0000)]
updated to version from Charles home dir
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@262
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edd [Tue, 30 Jun 2009 01:20:02 +0000 (01:20 +0000)]
added progress script incl new blacklist log
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@261
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edd [Tue, 30 Jun 2009 01:18:04 +0000 (01:18 +0000)]
added new command depclosure; added header and argv to what Charles had emailed
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@260
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blundellc [Mon, 29 Jun 2009 21:02:59 +0000 (21:02 +0000)]
a few updates
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@259
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edd [Mon, 29 Jun 2009 02:31:47 +0000 (02:31 +0000)]
a couple of updates
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@258
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edd [Thu, 25 Jun 2009 02:32:58 +0000 (02:32 +0000)]
logged a number of updates
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@257
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edd [Thu, 25 Jun 2009 02:04:58 +0000 (02:04 +0000)]
now current with recent additions (WriteXLS, ReadImages, surveillance, TIMP
)
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@256
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edd [Wed, 24 Jun 2009 12:17:02 +0000 (12:17 +0000)]
now current with recent additions (WriteXLS, Perl, latticist)
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@255
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edd [Wed, 24 Jun 2009 12:12:30 +0000 (12:12 +0000)]
now current with build machine and recent additions (WriteXLS, RImageJ, ...)
git-svn-id: svn://svn.r-forge.r-project.org/svnroot/cran2deb@254
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