git.donarmstrong.com Git - biopieces.git/tree

drwxr-xr-x		..
-rwxr-xr-x	315	test_add_ident	blob \| history \| raw
-rwxr-xr-x	109	test_align_seq	blob \| history \| raw
-rwxr-xr-x	171	test_analyze_assembly	blob \| history \| raw
-rwxr-xr-x	109	test_analyze_gc	blob \| history \| raw
-rwxr-xr-x	109	test_analyze_seq	blob \| history \| raw
-rwxr-xr-x	248	test_analyze_vals	blob \| history \| raw
-rwxr-xr-x	174	test_assemble_pairs	blob \| history \| raw
-rwxr-xr-x	185	test_bin_vals	blob \| history \| raw
-rwxr-xr-x	632	test_blast_seq	blob \| history \| raw
-rwxr-xr-x	366	test_blast_seq_pair	blob \| history \| raw
-rwxr-xr-x	171	test_calc_N50	blob \| history \| raw
-rwxr-xr-x	109	test_calc_bit_scores	blob \| history \| raw
-rwxr-xr-x	109	test_clip_adaptor	blob \| history \| raw
-rwxr-xr-x	109	test_clip_seq	blob \| history \| raw
-rwxr-xr-x	109	test_complement_seq	blob \| history \| raw
-rwxr-xr-x	340	test_create_blast_index	blob \| history \| raw
-rwxr-xr-x	156	test_create_seq_index	blob \| history \| raw
-rwxr-xr-x	353	test_digest_seq	blob \| history \| raw
-rwxr-xr-x	118	test_duplicate_record	blob \| history \| raw
-rwxr-xr-x	171	test_find_SNPs	blob \| history \| raw
-rwxr-xr-x	1193	test_find_adaptor	blob \| history \| raw
-rwxr-xr-x	1009	test_find_barcodes	blob \| history \| raw
-rwxr-xr-x	173	test_find_gaps	blob \| history \| raw
-rwxr-xr-x	309	test_find_homopolymers	blob \| history \| raw
-rwxr-xr-x	109	test_find_pairs	blob \| history \| raw
-rwxr-xr-x	549	test_get_seq	blob \| history \| raw
-rwxr-xr-x	759	test_grab	blob \| history \| raw
-rwxr-xr-x	116	test_index_vals	blob \| history \| raw
-rwxr-xr-x	175	test_join_seq	blob \| history \| raw
-rwxr-xr-x	109	test_kmer_freq	blob \| history \| raw
-rwxr-xr-x	109	test_length_seq	blob \| history \| raw
-rwxr-xr-x	118	test_length_vals	blob \| history \| raw
-rwxr-xr-x	109	test_lowercase_seq	blob \| history \| raw
-rwxr-xr-x	235	test_mask_seq	blob \| history \| raw
-rwxr-xr-x	186	test_max_vals	blob \| history \| raw
-rwxr-xr-x	239	test_mean_scores	blob \| history \| raw
-rwxr-xr-x	186	test_mean_vals	blob \| history \| raw
-rwxr-xr-x	186	test_median_vals	blob \| history \| raw
-rwxr-xr-x	109	test_merge_pair_seq	blob \| history \| raw
-rwxr-xr-x	186	test_min_vals	blob \| history \| raw
-rwxr-xr-x	109	test_order_pairs	blob \| history \| raw
-rwxr-xr-x	404	test_patscan_seq	blob \| history \| raw
-rwxr-xr-x	490	test_pcr_seq	blob \| history \| raw
-rwxr-xr-x	123	test_plot_distribution	blob \| history \| raw
-rwxr-xr-x	274	test_read_454	blob \| history \| raw
-rwxr-xr-x	173	test_read_blast_tab	blob \| history \| raw
-rwxr-xr-x	395	test_read_embl	blob \| history \| raw
-rwxr-xr-x	235	test_read_fasta	blob \| history \| raw
-rwxr-xr-x	516	test_read_fastq	blob \| history \| raw
-rwxr-xr-x	395	test_read_genbank	blob \| history \| raw
-rwxr-xr-x	307	test_read_sff	blob \| history \| raw
-rwxr-xr-x	619	test_read_tab	blob \| history \| raw
-rwxr-xr-x	109	test_remove_indel_columns	blob \| history \| raw
-rwxr-xr-x	109	test_remove_indels	blob \| history \| raw
-rwxr-xr-x	125	test_remove_keys	blob \| history \| raw
-rwxr-xr-x	172	test_remove_primers	blob \| history \| raw
-rwxr-xr-x	120	test_rename_keys	blob \| history \| raw
-rwxr-xr-x	313	test_replace_vals	blob \| history \| raw
-rwxr-xr-x	109	test_reverse_seq	blob \| history \| raw
-rwxr-xr-x	109	test_scores_to_dec	blob \| history \| raw
-rwxr-xr-x	120	test_shred_seq	blob \| history \| raw
-rwxr-xr-x	264	test_sort_records	blob \| history \| raw
-rwxr-xr-x	109	test_split_pair_seq	blob \| history \| raw
-rwxr-xr-x	458	test_substitute_vals	blob \| history \| raw
-rwxr-xr-x	186	test_sum_vals	blob \| history \| raw
-rwxr-xr-x	109	test_swapcase_seq	blob \| history \| raw
-rwxr-xr-x	178	test_translate_seq	blob \| history \| raw
-rwxr-xr-x	189	test_transliterate_seq	blob \| history \| raw
-rwxr-xr-x	203	test_transliterate_vals	blob \| history \| raw
-rwxr-xr-x	440	test_trim_seq	blob \| history \| raw
-rwxr-xr-x	240	test_uclust_seq	blob \| history \| raw
-rwxr-xr-x	171	test_uniq_seq	blob \| history \| raw
-rwxr-xr-x	185	test_uniq_vals	blob \| history \| raw
-rwxr-xr-x	109	test_uppercase_seq	blob \| history \| raw
-rwxr-xr-x	260	test_write_blast	blob \| history \| raw
-rwxr-xr-x	267	test_write_fasta	blob \| history \| raw
-rwxr-xr-x	286	test_write_fasta_files	blob \| history \| raw
-rwxr-xr-x	341	test_write_fastq	blob \| history \| raw
-rwxr-xr-x	429	test_write_fastq_files	blob \| history \| raw
-rwxr-xr-x	475	test_write_tab	blob \| history \| raw