From 658943d07afe151e66c8ddfa0fc1708a48515f9d Mon Sep 17 00:00:00 2001 From: martinahansen Date: Thu, 28 Feb 2013 13:56:09 +0000 Subject: [PATCH] fixed global SCORE_BASE in mean_scores git-svn-id: http://biopieces.googlecode.com/svn/trunk@2107 74ccb610-7750-0410-82ae-013aeee3265d --- bp_bin/mean_scores | 4 +--- 1 file changed, 1 insertion(+), 3 deletions(-) diff --git a/bp_bin/mean_scores b/bp_bin/mean_scores index 6e1ee59..ed9ab8c 100755 --- a/bp_bin/mean_scores +++ b/bp_bin/mean_scores @@ -31,8 +31,6 @@ require 'maasha/biopieces' require 'maasha/seq' require 'inline' -require 'pp' - # Opening class Seq to add scores_mean_local(_C) methods. class Seq @@ -40,7 +38,7 @@ class Seq # scores string and calculate for each window the mean score and return # the minimum mean score. def scores_mean_local(window_size) - scores_mean_local_C(self.qual, self.length, SCORE_BASE, window_size) + scores_mean_local_C(self.qual, self.length, Seq::SCORE_BASE, window_size) end inline do |builder| -- 2.39.2