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]> git.donarmstrong.com Git - biopieces.git/history - code_ruby/test/maasha/test_seq.rb

[biopieces.git] / code_ruby / test / maasha / test_seq.rb

2013-06-21	martinahansen	added edit_distance method to seq.rb	blob \| commitdiff \| raw
2013-06-04	martinahansen	revamped find_homopolymers	blob \| commitdiff \| raw \| diff to current
2013-03-12	martinahansen	added seq/assemble.rb	blob \| commitdiff \| raw \| diff to current
2013-03-11	martinahansen	added [] og []= to seq.rb	blob \| commitdiff \| raw \| diff to current
2013-03-08	martinahansen	added new Biopiece merge_pair_seq	blob \| commitdiff \| raw \| diff to current
2013-03-08	martinahansen	refactoring of ruby code converting sequences types...	blob \| commitdiff \| raw \| diff to current
2013-03-08	martinahansen	added << method to Seq.rb	blob \| commitdiff \| raw \| diff to current
2013-03-08	martinahansen	rewrite of FASTQ internals	blob \| commitdiff \| raw \| diff to current
2013-02-28	martinahansen	refactoring of revcomp in seq.rb	blob \| commitdiff \| raw \| diff to current
2013-02-28	martinahansen	added Seq.shuffle method and tests	blob \| commitdiff \| raw \| diff to current
2013-02-08	martinahansen	fixed quality score validity check	blob \| commitdiff \| raw \| diff to current
2013-02-04	martinahansen	added qual_valid? method to Seq.rb	blob \| commitdiff \| raw \| diff to current
2012-06-29	martinahansen	added scores_mean method to seq.rb	blob \| commitdiff \| raw \| diff to current
2012-05-23	martinahansen	rewrite of seq.rb and addition of seq/trim.rb	blob \| commitdiff \| raw \| diff to current
2012-04-11	martinahansen	ported write_fastq to ruby and allowed different encodi...	blob \| commitdiff \| raw \| diff to current
2012-02-03	martinahansen	rounding up work on denoise_seq	blob \| commitdiff \| raw \| diff to current
2012-01-23	martinahansen	rewrote mask_seq_hard and mask_seq_soft methods to...	blob \| commitdiff \| raw \| diff to current
2012-01-11	martinahansen	added remove_indels method	blob \| commitdiff \| raw \| diff to current
2011-11-09	martinahansen	fixed bug in seq.to_fasta	blob \| commitdiff \| raw \| diff to current
2011-11-01	martinahansen	added quality_trim to seq.rb along with unit tests	blob \| commitdiff \| raw \| diff to current
2011-11-01	martinahansen	fixed unit tests for reverse and revcomp in seq.rb	blob \| commitdiff \| raw \| diff to current
2011-10-13	martinahansen	added Class method Seq.new_bp to seq.rb	blob \| commitdiff \| raw \| diff to current
2011-10-13	martinahansen	added to_fastq method seq.rb	blob \| commitdiff \| raw \| diff to current
2011-09-05	martinahansen	added hamming_distance method to seq.rb	blob \| commitdiff \| raw \| diff to current
2011-06-13	martinahansen	added Seq.type_guess to ruby code	blob \| commitdiff \| raw \| diff to current
2011-05-13	martinahansen	changed layout of ruby source	blob \| commitdiff \| raw \| diff to current

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