From: martinahansen <martinahansen@74ccb610-7750-0410-82ae-013aeee3265d>
Date: Tue, 3 Dec 2013 11:42:43 +0000 (+0000)
Subject: fixed name issue in uclust_seq
X-Git-Url: https://git.donarmstrong.com/?p=biopieces.git;a=commitdiff_plain;h=ea737d66bd9dbc2f134c0809f026239ad4caf473

fixed name issue in uclust_seq

git-svn-id: http://biopieces.googlecode.com/svn/trunk@2271 74ccb610-7750-0410-82ae-013aeee3265d
---

diff --git a/bp_bin/uclust_seq b/bp_bin/uclust_seq
index 5a6d0ef..5b162c4 100755
--- a/bp_bin/uclust_seq
+++ b/bp_bin/uclust_seq
@@ -71,8 +71,8 @@ end
 Biopieces.open(file_records, options[:stream_out]) do |input, output|
   input.each_record do |record|
     if record[:SEQ_NAME] and record[:SEQ]
-      if hash[record[:SEQ_NAME].to_sym]
-        us = hash[record[:SEQ_NAME].to_sym]
+      seq_name = record[:SEQ_NAME].split(/\s+/).first.to_sym
+      if us = hash[seq_name]
         record[:CLUSTER] = us[:CLUSTER].to_i
         record[:IDENT]   = us[:IDENT].to_i
         record[:IDENT] = '*' if us[:TYPE] == 'S'