From: martinahansen <martinahansen@74ccb610-7750-0410-82ae-013aeee3265d>
Date: Tue, 9 Oct 2012 08:56:00 +0000 (+0000)
Subject: cleanup of findsim_seq
X-Git-Url: https://git.donarmstrong.com/?p=biopieces.git;a=commitdiff_plain;h=d08dc4fcc03f52890c6bcd122129fe95f17c9aee

cleanup of findsim_seq

git-svn-id: http://biopieces.googlecode.com/svn/trunk@1952 74ccb610-7750-0410-82ae-013aeee3265d
---

diff --git a/bp_bin/findsim_seq b/bp_bin/findsim_seq
index 183bae5..0d0a58b 100755
--- a/bp_bin/findsim_seq
+++ b/bp_bin/findsim_seq
@@ -39,7 +39,7 @@ casts << {:long=>'kmer',          :short=>'k', :type=>'uint',  :mandatory=>false
 casts << {:long=>'step',          :short=>'s', :type=>'uint',  :mandatory=>false, :default=>1,   :allowed=>nil,           :disallowed=>"0"}
 casts << {:long=>'min_score',     :short=>'m', :type=>'float', :mandatory=>false, :default=>0.5, :allowed=>nil,           :disallowed=>nil}
 casts << {:long=>'max_hits',      :short=>'h', :type=>'uint',  :mandatory=>false, :default=>7,   :allowed=>nil,           :disallowed=>"0"}
-casts << {:long=>'max_diversity', :short=>'M', :type=>'uint',  :mandatory=>false, :default=>5,   :allowed=>nil,           :disallowed=>nil}
+casts << {:long=>'max_diversity', :short=>'M', :type=>'float', :mandatory=>false, :default=>5,   :allowed=>nil,           :disallowed=>nil}
 casts << {:long=>'query_ids',     :short=>'Q', :type=>'flag',  :mandatory=>false, :default=>nil, :allowed=>nil,           :disallowed=>nil}
 casts << {:long=>'subject_ids',   :short=>'S', :type=>'flag',  :mandatory=>false, :default=>nil, :allowed=>nil,           :disallowed=>nil}
 casts << {:long=>'realign',       :short=>'r', :type=>'flag',  :mandatory=>false, :default=>nil, :allowed=>nil,           :disallowed=>nil}