From: martinahansen <martinahansen@74ccb610-7750-0410-82ae-013aeee3265d>
Date: Thu, 28 Feb 2013 13:56:09 +0000 (+0000)
Subject: fixed global SCORE_BASE in mean_scores
X-Git-Url: https://git.donarmstrong.com/?p=biopieces.git;a=commitdiff_plain;h=658943d07afe151e66c8ddfa0fc1708a48515f9d

fixed global SCORE_BASE in mean_scores

git-svn-id: http://biopieces.googlecode.com/svn/trunk@2107 74ccb610-7750-0410-82ae-013aeee3265d
---

diff --git a/bp_bin/mean_scores b/bp_bin/mean_scores
index 6e1ee59..ed9ab8c 100755
--- a/bp_bin/mean_scores
+++ b/bp_bin/mean_scores
@@ -31,8 +31,6 @@
 require 'maasha/biopieces'
 require 'maasha/seq'
 require 'inline'
-require 'pp'
-
 
 # Opening class Seq to add scores_mean_local(_C) methods.
 class Seq
@@ -40,7 +38,7 @@ class Seq
   # scores string and calculate for each window the mean score and return
   # the minimum mean score.
   def scores_mean_local(window_size)
-    scores_mean_local_C(self.qual, self.length, SCORE_BASE, window_size)
+    scores_mean_local_C(self.qual, self.length, Seq::SCORE_BASE, window_size)
   end
 
   inline do |builder|