X-Git-Url: https://git.donarmstrong.com/?p=biopieces.git;a=blobdiff_plain;f=bp_bin%2Fmean_scores;h=ed9ab8c409e82e24d1e30c5e053afebe4674a651;hp=6e1ee59803b8ca95e90abdc5a5aa9af44380ee1a;hb=658943d07afe151e66c8ddfa0fc1708a48515f9d;hpb=b982cc677363d7458963b610ec53bf2c4f7476a9 diff --git a/bp_bin/mean_scores b/bp_bin/mean_scores index 6e1ee59..ed9ab8c 100755 --- a/bp_bin/mean_scores +++ b/bp_bin/mean_scores @@ -31,8 +31,6 @@ require 'maasha/biopieces' require 'maasha/seq' require 'inline' -require 'pp' - # Opening class Seq to add scores_mean_local(_C) methods. class Seq @@ -40,7 +38,7 @@ class Seq # scores string and calculate for each window the mean score and return # the minimum mean score. def scores_mean_local(window_size) - scores_mean_local_C(self.qual, self.length, SCORE_BASE, window_size) + scores_mean_local_C(self.qual, self.length, Seq::SCORE_BASE, window_size) end inline do |builder|