class TestDynamic < Test::Unit::TestCase
def setup
- @p = Seq.new("test", "atcg")
+ @p = Seq.new(seq_name: "test", seq: "atcg")
@p.extend(Dynamic)
end
end
test "#patscan locates three patterns ok" do
- p = Seq.new("test", "ataacgagctagctagctagctgactac")
+ p = Seq.new(seq_name: "test", seq: "ataacgagctagctagctagctgactac")
p.extend(Dynamic)
assert_equal(3, p.patscan("tag").count)
end
test "#patscan with pos locates two patterns ok" do
- p = Seq.new("test", "ataacgagctagctagctagctgactac")
+ p = Seq.new(seq_name: "test", seq: "ataacgagctagctagctagctgactac")
p.extend(Dynamic)
assert_equal(2, p.patscan("tag", 10).count)
end