read_solexa now handles both decimal and octal scores

[biopieces.git] / code_c / Maasha / src / lib / Makefile

diff --git a/code_c/Maasha/src/lib/Makefile b/code_c/Maasha/src/lib/Makefile
index 7b9c64e82bcb2e7c49f8c411d719a7eb39c137be..5f608457ddc10fd16f955dc43da4a2b0c6accccb 100644 (file)
--- a/code_c/Maasha/src/lib/Makefile
+++ b/code_c/Maasha/src/lib/Makefile
@@ -3,7 +3,10 @@ CC      = gcc
 Cflags = -Wall -Werror -g -pg  # gprof
 INC_DIR = -I ../inc/
 
-all: common.o mem.o strings.o seq.o filesys.o fasta.o list.o hash.o ucsc.o
+all: bits.o common.o mem.o strings.o seq.o filesys.o fasta.o list.o hash.o ucsc.o
+
+bits.o: bits.c
+       $(CC) $(Cflags) $(INC_DIR) -c bits.c
 
 common.o: common.c
        $(CC) $(Cflags) $(INC_DIR) -c common.c
@@ -33,6 +36,7 @@ ucsc.o: ucsc.c
        $(CC) $(Cflags) $(INC_DIR) -c ucsc.c
 
 clean:
+       rm bits.o
        rm common.o
        rm mem.o
        rm strings.o