]> git.donarmstrong.com Git - biopieces.git/blobdiff - bp_bin/bwa_seq
refactoring of ruby code s/has_key?/[]/
[biopieces.git] / bp_bin / bwa_seq
index 4fd89a253427fa7ab8f24c52785317cbf1fc1de3..fd807821dac3dfe3728a8b34dae9f7ee1ec25fc3 100755 (executable)
@@ -102,7 +102,7 @@ Biopieces.open(options[:stream_in], options[:stream_out]) do |input, output|
     input.each_record do |record|
       output.puts record
 
-      if record.has_key? :SEQ_NAME and record.has_key? :SEQ and record.has_key? :SCORES
+      if record[:SEQ_NAME] and record[:SEQ] and record[:SCORES]
         entry = Seq.new_bp(record)
 
         io_fq.puts entry.to_fastq