changed Seq.new argument to hash

[biopieces.git] / bp_bin / analyze_seq

diff --git a/bp_bin/analyze_seq b/bp_bin/analyze_seq
index c2b96a5070b252bbe89f9e2e1c1fbd63055432a0..2c38a274beeb593394ec5d33663d4dec1129de23 100755 (executable)
--- a/bp_bin/analyze_seq
+++ b/bp_bin/analyze_seq
@@ -39,7 +39,7 @@ options = Biopieces.options_parse(ARGV, casts)
 Biopieces.open(options[:stream_in], options[:stream_out]) do |input, output|
   input.each_record do |record|
     if record[:SEQ]
-      seq  = Seq.new(record[:SEQ_NAME], record[:SEQ], record[:SEQ_TYPE], record[:SCORE])
+      seq  = Seq.new_bp(record)
       comp = seq.composition
 
       comp.each_pair do |key,val|