From: Chase Miller <chmille4@gmail.com>
Date: Wed, 24 Jul 2013 17:02:09 +0000 (-0400)
Subject: Fix invalid json output
X-Git-Url: https://git.donarmstrong.com/?p=bamtools.git;a=commitdiff_plain;h=ffe08406d4839cc92238a9a65e09c630330f5065

Fix invalid json output

add quotes to the filename variable so that the json outputed is valid json
---

diff --git a/src/toolkit/bamtools_convert.cpp b/src/toolkit/bamtools_convert.cpp
index b0aae07..54820e7 100644
--- a/src/toolkit/bamtools_convert.cpp
+++ b/src/toolkit/bamtools_convert.cpp
@@ -423,7 +423,7 @@ void ConvertTool::ConvertToolPrivate::PrintJson(const BamAlignment& a) {
     }
     
     // write alignment's source BAM file
-    m_out << "\"filename\":" << a.Filename << ",";
+    m_out << "\"filename\":\"" << a.Filename << "\",";
 
     // write tag data
     const char* tagData = a.TagData.c_str();