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(parent: acdea35) | patch
Reorganized source tree & build system
authorDerek <derekwbarnett@gmail.com>
Wed, 18 Aug 2010 19:19:08 +0000 (15:19 -0400)
committerDerek <derekwbarnett@gmail.com>
Wed, 18 Aug 2010 19:19:08 +0000 (15:19 -0400)
commit0180d7256f5c781364b04559b39ed2db41585787
tree45020c15301cd1fb96033f710f79563ff2545132tree | snapshot
parentacdea352102b176dc519f6cbdd7980d1041079c2commit | diff
Reorganized source tree & build system
88 files changed:
BGZF.cpp [deleted file] blob | history
BGZF.h [deleted file] blob | history
BamAux.h [deleted file] blob | history
BamIndex.cpp [deleted file] blob | history
BamIndex.h [deleted file] blob | history
BamMultiReader.cpp [deleted file] blob | history
BamMultiReader.h [deleted file] blob | history
BamReader.cpp [deleted file] blob | history
BamReader.h [deleted file] blob | history
BamWriter.cpp [deleted file] blob | history
BamWriter.h [deleted file] blob | history
Makefile diff | blob | history
bamtools.cpp [deleted file] blob | history
bamtools_convert.cpp [deleted file] blob | history
bamtools_convert.h [deleted file] blob | history
bamtools_count.cpp [deleted file] blob | history
bamtools_count.h [deleted file] blob | history
bamtools_coverage.cpp [deleted file] blob | history
bamtools_coverage.h [deleted file] blob | history
bamtools_fasta.cpp [deleted file] blob | history
bamtools_fasta.h [deleted file] blob | history
bamtools_filter.cpp [deleted file] blob | history
bamtools_filter.h [deleted file] blob | history
bamtools_header.cpp [deleted file] blob | history
bamtools_header.h [deleted file] blob | history
bamtools_index.cpp [deleted file] blob | history
bamtools_index.h [deleted file] blob | history
bamtools_merge.cpp [deleted file] blob | history
bamtools_merge.h [deleted file] blob | history
bamtools_options.cpp [deleted file] blob | history
bamtools_options.h [deleted file] blob | history
bamtools_pileup.cpp [deleted file] blob | history
bamtools_pileup.h [deleted file] blob | history
bamtools_random.cpp [deleted file] blob | history
bamtools_random.h [deleted file] blob | history
bamtools_sort.cpp [deleted file] blob | history
bamtools_sort.h [deleted file] blob | history
bamtools_stats.cpp [deleted file] blob | history
bamtools_stats.h [deleted file] blob | history
bamtools_tool.h [deleted file] blob | history
bamtools_utilities.cpp [deleted file] blob | history
bamtools_utilities.h [deleted file] blob | history
bamtools_variant.h [deleted file] blob | history
src/api/BGZF.cpp [new file with mode: 0644] blob
src/api/BGZF.h [new file with mode: 0644] blob
src/api/BamAux.h [new file with mode: 0644] blob
src/api/BamIndex.cpp [new file with mode: 0644] blob
src/api/BamIndex.h [new file with mode: 0644] blob
src/api/BamMultiReader.cpp [new file with mode: 0644] blob
src/api/BamMultiReader.h [new file with mode: 0644] blob
src/api/BamReader.cpp [new file with mode: 0644] blob
src/api/BamReader.h [new file with mode: 0644] blob
src/api/BamWriter.cpp [new file with mode: 0644] blob
src/api/BamWriter.h [new file with mode: 0644] blob
src/api/Makefile [new file with mode: 0644] blob
src/toolkit/Makefile [new file with mode: 0644] blob
src/toolkit/bamtools.cpp [new file with mode: 0644] blob
src/toolkit/bamtools_convert.cpp [new file with mode: 0644] blob
src/toolkit/bamtools_convert.h [new file with mode: 0644] blob
src/toolkit/bamtools_count.cpp [new file with mode: 0644] blob
src/toolkit/bamtools_count.h [new file with mode: 0644] blob
src/toolkit/bamtools_coverage.cpp [new file with mode: 0644] blob
src/toolkit/bamtools_coverage.h [new file with mode: 0644] blob
src/toolkit/bamtools_filter.cpp [new file with mode: 0644] blob
src/toolkit/bamtools_filter.h [new file with mode: 0644] blob
src/toolkit/bamtools_header.cpp [new file with mode: 0644] blob
src/toolkit/bamtools_header.h [new file with mode: 0644] blob
src/toolkit/bamtools_index.cpp [new file with mode: 0644] blob
src/toolkit/bamtools_index.h [new file with mode: 0644] blob
src/toolkit/bamtools_merge.cpp [new file with mode: 0644] blob
src/toolkit/bamtools_merge.h [new file with mode: 0644] blob
src/toolkit/bamtools_random.cpp [new file with mode: 0644] blob
src/toolkit/bamtools_random.h [new file with mode: 0644] blob
src/toolkit/bamtools_sort.cpp [new file with mode: 0644] blob
src/toolkit/bamtools_sort.h [new file with mode: 0644] blob
src/toolkit/bamtools_stats.cpp [new file with mode: 0644] blob
src/toolkit/bamtools_stats.h [new file with mode: 0644] blob
src/toolkit/bamtools_tool.h [new file with mode: 0644] blob
src/utils/Makefile [new file with mode: 0644] blob
src/utils/bamtools_fasta.cpp [new file with mode: 0644] blob
src/utils/bamtools_fasta.h [new file with mode: 0644] blob
src/utils/bamtools_options.cpp [new file with mode: 0644] blob
src/utils/bamtools_options.h [new file with mode: 0644] blob
src/utils/bamtools_pileup.cpp [new file with mode: 0644] blob
src/utils/bamtools_pileup.h [new file with mode: 0644] blob
src/utils/bamtools_utilities.cpp [new file with mode: 0644] blob
src/utils/bamtools_utilities.h [new file with mode: 0644] blob
src/utils/bamtools_variant.h [new file with mode: 0644] blob
Branch of bamtools which has rudimentary Debian packaging