X-Git-Url: https://git.donarmstrong.com/?p=bamtools.git;a=blobdiff_plain;f=src%2Fapi%2Finternal%2FSamHeaderValidator_p.cpp;h=c76fff95ba3a9fd2d8198abd1fd1cb035f7df91f;hp=9d7f6d42dcb6c63fba649827edb2a71cf581583a;hb=af6a3d8491e485969d2df306e41cb9439dec4039;hpb=6a75f0d886c44d98a6fba6513d2f3e9f158659ed

diff --git a/src/api/internal/SamHeaderValidator_p.cpp b/src/api/internal/SamHeaderValidator_p.cpp
index 9d7f6d4..c76fff9 100644
--- a/src/api/internal/SamHeaderValidator_p.cpp
+++ b/src/api/internal/SamHeaderValidator_p.cpp
@@ -2,7 +2,7 @@
 // SamHeaderValidator.cpp (c) 2010 Derek Barnett
 // Marth Lab, Department of Biology, Boston College
 // ---------------------------------------------------------------------------
-// Last modified: 12 October 2011 (DB)
+// Last modified: 14 October 2011 (DB)
 // ---------------------------------------------------------------------------
 // Provides functionality for validating SamHeader data
 // ***************************************************************************
@@ -244,7 +244,7 @@ bool SamHeaderValidator::ValidateSequenceDictionary(void) {
     SamSequenceConstIterator seqIter = sequences.ConstBegin();
     SamSequenceConstIterator seqEnd  = sequences.ConstEnd();
     for ( ; seqIter != seqEnd; ++seqIter ) {
-        const SamSequence& seq = seqIter->second;
+        const SamSequence& seq = (*seqIter);
         isValid &= ValidateSequence(seq);
     }
 
@@ -264,7 +264,7 @@ bool SamHeaderValidator::ContainsUniqueSequenceNames(void) {
     SamSequenceConstIterator seqIter = sequences.ConstBegin();
     SamSequenceConstIterator seqEnd  = sequences.ConstEnd();
     for ( ; seqIter != seqEnd; ++seqIter ) {
-        const SamSequence& seq = seqIter->second;
+        const SamSequence& seq = (*seqIter);
 
         // lookup sequence name
         const string& name = seq.Name;
@@ -348,7 +348,7 @@ bool SamHeaderValidator::ValidateReadGroupDictionary(void) {
     SamReadGroupConstIterator rgIter = readGroups.ConstBegin();
     SamReadGroupConstIterator rgEnd  = readGroups.ConstEnd();
     for ( ; rgIter != rgEnd; ++rgIter ) {
-        const SamReadGroup& rg = rgIter->second;
+        const SamReadGroup& rg = (*rgIter);
         isValid &= ValidateReadGroup(rg);
     }
 
@@ -370,7 +370,7 @@ bool SamHeaderValidator::ContainsUniqueIDsAndPlatformUnits(void) {
     SamReadGroupConstIterator rgIter = readGroups.ConstBegin();
     SamReadGroupConstIterator rgEnd  = readGroups.ConstEnd();
     for ( ; rgIter != rgEnd; ++rgIter ) {
-        const SamReadGroup& rg = rgIter->second;
+        const SamReadGroup& rg = (*rgIter);
 
         // --------------------------------
         // check for unique ID