Merge branches 'master' and 'iodevice' into iodevice

[bamtools.git] / src / api / internal / BamWriter_p.cpp

diff --git a/src/api/internal/BamWriter_p.cpp b/src/api/internal/BamWriter_p.cpp
index e77c099f8a53b6488e39c6c2e3a630c3e1884570..c9199b9a7b7859dfbfd4b0ef48f0de8aa58dc0f3 100644 (file)
--- a/src/api/internal/BamWriter_p.cpp
+++ b/src/api/internal/BamWriter_p.cpp
@@ -9,6 +9,7 @@
 
 #include <api/BamAlignment.h>
 #include <api/BamConstants.h>
+#include <api/IBamIODevice.h>
 #include <api/internal/BamWriter_p.h>
 using namespace BamTools;
 using namespace BamTools::Internal;
@@ -124,7 +125,7 @@ void BamWriterPrivate::EncodeQuerySequence(const string& query, string& encodedQ
 
 // returns whether BAM file is open for writing or not
 bool BamWriterPrivate::IsOpen(void) const {
-    return m_stream.IsOpen;
+    return m_stream.IsOpen();
 }
 
 // opens the alignment archive
@@ -133,7 +134,7 @@ bool BamWriterPrivate::Open(const string& filename,
                             const RefVector& referenceSequences)
 {
     // open the BGZF file for writing, return failure if error
-    if ( !m_stream.Open(filename, "wb") )
+    if ( !m_stream.Open(filename, IBamIODevice::WriteOnly) )
         return false;
 
     // write BAM file 'metadata' components