bool Jump(const BamTools::BamRegion& region, bool* hasAlignmentsInRegion);
// loads existing data from file into memory
bool Load(const std::string& filename);
- // change the index caching behavior
- void SetCacheMode(const BamIndex::IndexCacheMode& mode);
public:
// returns format's file extension
static const std::string Extension(void);
// data members
private:
bool m_isBigEndian;
- BamIndex::IndexCacheMode m_cacheMode;
BaiFileSummary m_indexFileSummary;
// our input buffer