# ==========================
# BamTools CMakeLists.txt
# (c) 2010 Derek Barnett
#
# src/toolkit
# ==========================

# set include path
include_directories ( ${BamTools_SOURCE_DIR}/src/api
                      ${BamTools_SOURCE_DIR}/src/utils
                      ${BamTools_SOURCE_DIR}/src/third_party
                    )

# compile main bamtools application
add_executable ( bamtools
                 bamtools_convert.cpp
                 bamtools_count.cpp
                 bamtools_coverage.cpp
                 bamtools_filter.cpp
                 bamtools_header.cpp
                 bamtools_index.cpp
                 bamtools_merge.cpp
                 bamtools_random.cpp
                 bamtools_resolve.cpp
		         bamtools_revert.cpp
                 bamtools_sort.cpp
                 bamtools_split.cpp
                 bamtools_stats.cpp
                 bamtools.cpp
               )

# set BamTools application properties
set_target_properties( BamTools PROPERTIES
                       VERSION  1.0.2
                     )
# make version info available in application
configure_file(bamtools_version.h.in ${BamTools_SOURCE_DIR}/src/toolkit/bamtools_version.h)

# define libraries to link
target_link_libraries ( bamtools BamTools BamTools-utils jsoncpp )

# set application install destinations
install( TARGETS bamtools DESTINATION "bin")