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author	paradis <paradis@6e262413-ae40-0410-9e79-b911bd7a66b7>
	Thu, 8 Jan 2009 08:48:22 +0000 (08:48 +0000)
committer	paradis <paradis@6e262413-ae40-0410-9e79-b911bd7a66b7>
	Thu, 8 Jan 2009 08:48:22 +0000 (08:48 +0000)
commit	f3426364b40c7c0e6aadf6ea2690716425abdfc9
tree	1fb470c0ac028507c6030154015c12df24254a3f	tree \| snapshot
parent	3f528bd2c47301b64ed03bd28039bbf22a7510ad	commit \| diff

various updates + adding SPR+TBR in fastme.bal()

git-svn-id: https://svn.mpl.ird.fr/ape/dev/ape@57 6e262413-ae40-0410-9e79-b911bd7a66b7

21 files changed:

ChangeLog		diff \| blob \| history
DESCRIPTION		diff \| blob \| history
NAMESPACE	[new file with mode: 0644]	blob
R/DNA.R		diff \| blob \| history
R/collapse.singles.R		diff \| blob \| history
R/drop.tip.R		diff \| blob \| history
R/me.R		diff \| blob \| history
Thanks		diff \| blob \| history
man/dist.dna.Rd		diff \| blob \| history
man/drop.tip.Rd		diff \| blob \| history
man/fastme.Rd		diff \| blob \| history
src/NNI.c		diff \| blob \| history
src/SPR.c	[new file with mode: 0644]	blob
src/TBR.c	[new file with mode: 0644]	blob
src/bNNI.c		diff \| blob \| history
src/dist_dna.c		diff \| blob \| history
src/heap.c		diff \| blob \| history
src/me.c		diff \| blob \| history
src/me.h		diff \| blob \| history
src/me_balanced.c		diff \| blob \| history
src/me_ols.c		diff \| blob \| history

Local fork of ape (analysis of ecology)