The method, which is described in detail in Legendre et al. (2002), requires some estimates of the phylogenetic trees or phylogenetic distances, and also a description of the host-parasite associations (H-P links) observed in nature.
}
\usage{
-parafit(host.D, para.D ,HP ,nperm=999, test.links=FALSE, seed=NULL,
-correction="none", silent=FALSE)
+parafit(host.D, para.D, HP, nperm = 999, test.links = FALSE,
+ seed = NULL, correction = "none", silent = FALSE)
}
\arguments{