a bunch of modifications and fixes

[ape.git] / man / compar.ou.Rd

diff --git a/man/compar.ou.Rd b/man/compar.ou.Rd
index 4c1c02bca4edd037b41bc86e56ac2350bde83ffd..84be45483a7ad914fbaf47cac673ca7e1d4f4d0b 100644 (file)
--- a/man/compar.ou.Rd
+++ b/man/compar.ou.Rd
@@ -86,9 +86,9 @@ compar.ou(x, phy, node = NULL, alpha = NULL)
 data(bird.orders)
 ### This is likely to give you estimates close to 0, 1, and 0
 ### for alpha, sigma^2, and theta, respectively:
-compar.ou(rnorm(23), bird.orders)
+compar.ou(x <- rnorm(23), bird.orders)
 ### Much better with a fixed alpha:
-compar.ou(rnorm(23), bird.orders, alpha = 0.1)
+compar.ou(x, bird.orders, alpha = 0.1)
 ### Let us 'mimick' the effect of different optima
 ### for the two clades of birds...
 x <- c(rnorm(5, 0), rnorm(18, 5))
@@ -97,6 +97,6 @@ compar.ou(x, bird.orders, node = 25, alpha = .1)
 ### ... and the model with a single optimum:
 compar.ou(x, bird.orders, node = NULL, alpha = .1)
 ### => Compare both models with the difference in deviances
-##     wicth follows a chi^2 with df = 1.
+##     which follows a chi^2 with df = 1.
 }
 \keyword{models}