index.only = TRUE to return only the vector of indices (the tree
is unmodified, see ?reorder.phylo for details).
- o The three new functions node.depth.length, node.height, and
+ o The three new functions node.depth.edgelength, node.height, and
node.height.clado make some internal code available from R. See
?node.depth (which was already available and documented) for
details.
o reorder(, "pruningwise") made R crash if the rows of the edge
matrix are in random order: this is now fixed.
+ o drop.tip() sometimes shuffled node labels (thanks to Rebecca Best
+ for the report).
+
OTHER CHANGES