bug fix in seg.sites + new option in base.freq

[ape.git] / DESCRIPTION

diff --git a/DESCRIPTION b/DESCRIPTION
index 1b4f9b925daec943abfe31ce6a24190e5c10f112..4aa608cbe7624e9a7e0cc3d081a61f908be2a95d 100644 (file)
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,15 +1,12 @@
 Package: ape
-Version: 2.2-2
-Date: 2008-09-17
+Version: 2.3-4
+Date: 2009-09-16
 Title: Analyses of Phylogenetics and Evolution
-Author: Emmanuel Paradis, Ben Bolker, Julien Claude, Hoa Sien Cuong,
-  Richard Desper, Benoit Durand, Julien Dutheil, Olivier Gascuel,
-  Gangolf Jobb, Christoph Heibl, Vincent Lefort, Jim Lemon,
-  Yvonnick Noel, Johan Nylander, Rainer Opgen-Rhein, Korbinian Strimmer,
-  Damien de Vienne
-Maintainer: Emmanuel Paradis <Emmanuel.Paradis@mpl.ird.fr>
+Author: Emmanuel Paradis, Ben Bolker, Julien Claude, Hoa Sien Cuong, Richard Desper, Benoit Durand, Julien Dutheil, Olivier Gascuel, Gangolf Jobb, Christoph Heibl, Daniel Lawson, Vincent Lefort, Pierre Legendre, Jim Lemon, Yvonnick Noel, Johan Nylander, Rainer Opgen-Rhein, Korbinian Strimmer, Damien de Vienne
+Maintainer: Emmanuel Paradis <Emmanuel.Paradis@ird.fr>
 Depends: R (>= 2.6.0)
-Suggests: gee, nlme, lattice
+Suggests: gee
+Imports: gee, nlme, lattice
 ZipData: no
 Description: ape provides functions for reading, writing, plotting,
   and manipulating phylogenetic trees, analyses of comparative data
@@ -20,8 +17,7 @@ Description: ape provides functions for reading, writing, plotting,
   parameter theta based on various approaches, nucleotide diversity,
   generalized skyline plots, estimation of absolute evolutionary rates
   and clock-like trees using mean path lengths, non-parametric rate
-  smoothing and penalized likelihood, classifying genes in trees using
-  the Klastorin-Misawa-Tajima approach. Phylogeny estimation can be done
-  with the NJ, BIONJ, ME, and ML methods.
+  smoothing and penalized likelihood. Phylogeny estimation can be done
+  with the NJ, BIONJ, and ME methods.
 License: GPL (>= 2)
 URL: http://ape.mpl.ird.fr/