\name{corBlomberg} \alias{corBlomberg} \alias{coef.corBlomberg} \alias{corMatrix.corBlomberg} \title{Blomberg et al.'s Correlation Structure} \usage{ corBlomberg(value, phy, form = ~1, fixed = FALSE) \method{corMatrix}{corBlomberg}(object, covariate = getCovariate(object), corr = TRUE, ...) \method{coef}{corBlomberg}(object, unconstrained = TRUE, \dots) } \arguments{ \item{value}{the (initial) value of the parameter \eqn{g}{g}.} \item{phy}{an object of class \code{"phylo"}.} \item{form}{(ignored).} \item{fixed}{a logical specifying whether \code{gls} should estimate \eqn{\gamma}{gamma} (the default) or keep it fixed.} \item{object}{an (initialized) object of class \code{"corBlomberg"}.} \item{covariate}{(ignored).} \item{corr}{a logical value specifying whether to return the correlation matrix (the default) or the variance-covariance matrix.} \item{unconstrained}{a logical value. If \code{TRUE} (the default), the coefficients are returned in unconstrained form (the same used in the optimization algorithm). If \code{FALSE} the coefficients are returned in ``natural'', possibly constrained, form.} \item{\dots}{further arguments passed to or from other methods.} } \description{ The ``ACDC'' (accelerated/decelerated) model assumes that continuous traits evolve under a Brownian motion model which rates accelerates (if \eqn{g}{g} < 1) or decelerates (if \eqn{g}{g} > 1) through time. If \eqn{g}{g} = 1, then the model reduces to a Brownian motion model. } \value{ an object of class \code{"corBlomberg"}, the coefficients from an object of this class, or the correlation matrix of an initialized object of this class. In most situations, only \code{corBlomberg} will be called by the user. } \author{Emmanuel Paradis} \references{ Blomberg, S. P., Garland, Jr, T., and Ives, A. R. (2003) Testing for phylogenetic signal in comparative data: behavioral traits are more labile. \emph{Evolution}, \bold{57}, 717--745. } \keyword{models}