]> git.donarmstrong.com Git - biopieces.git/tree - bp_bin/
this will probably break
[biopieces.git] / bp_bin /
drwxr-xr-x   ..
-rwxr-xr-x 71 add_ident
-rwxr-xr-x 71 align_seq
-rwxr-xr-x 71 analyze_bed
-rwxr-xr-x 71 analyze_seq
-rwxr-xr-x 71 analyze_tags
-rwxr-xr-x 71 analyze_vals
-rwxr-xr-x 71 blast_seq
-rwxr-xr-x 71 blat_seq
-rwxr-xr-x 71 calc_bit_scores
-rwxr-xr-x 71 complement_seq
-rwxr-xr-x 71 complexity_seq
-rwxr-xr-x 71 compute
-rwxr-xr-x 71 count_records
-rwxr-xr-x 71 count_vals
-rwxr-xr-x 71 create_blast_db
-rwxr-xr-x 71 create_vmatch_index
-rwxr-xr-x 71 create_weight_matrix
-rwxr-xr-x 71 extract_seq
-rwxr-xr-x 71 flip_tab
-rwxr-xr-x 71 fold_seq
-rwxr-xr-x 71 get_genome_align
-rwxr-xr-x 71 get_genome_phastcons
-rwxr-xr-x 71 get_genome_seq
-rwxr-xr-x 71 grab
-rwxr-xr-x 71 head_records
-rwxr-xr-x 71 invert_align
-rwxr-xr-x 71 length_seq
-rwxr-xr-x 71 length_vals
-rwxr-xr-x 71 list_biotools
-rwxr-xr-x 71 match_seq
-rwxr-xr-x 71 max_vals
-rwxr-xr-x 71 mean_vals
-rwxr-xr-x 71 median_vals
-rwxr-xr-x 71 merge_vals
-rwxr-xr-x 71 min_vals
-rwxr-xr-x 71 oligo_freq
-rwxr-xr-x 71 patscan_seq
-rwxr-xr-x 71 plot_chrdist
-rwxr-xr-x 71 plot_histogram
-rwxr-xr-x 71 plot_karyogram
-rwxr-xr-x 71 plot_lendist
-rwxr-xr-x 71 plot_matches
-rwxr-xr-x 71 plot_phastcons_profiles
-rwxr-xr-x 71 plot_seqlogo
-rwxr-xr-x 71 print_usage
-rwxr-xr-x 71 random_records
-rwxr-xr-x 71 read_2bit
-rwxr-xr-x 71 read_align
-rwxr-xr-x 71 read_bed
-rwxr-xr-x 71 read_blast_tab
-rwxr-xr-x 71 read_embl
-rwxr-xr-x 71 read_fasta
-rwxr-xr-x 71 read_gff
-rwxr-xr-x 71 read_mysql
-rwxr-xr-x 71 read_phastcons
-rwxr-xr-x 71 read_psl
-rwxr-xr-x 71 read_soft
-rwxr-xr-x 71 read_solexa
-rwxr-xr-x 71 read_solid
-rwxr-xr-x 71 read_stockholm
-rwxr-xr-x 71 read_tab
-rwxr-xr-x 71 remove_indels
-rwxr-xr-x 71 remove_keys
-rwxr-xr-x 71 rename_keys
-rwxr-xr-x 71 reverse_seq
-rwxr-xr-x 71 shuffle_seq
-rwxr-xr-x 71 sort_records
-rwxr-xr-x 71 split_bed
-rwxr-xr-x 71 split_seq
-rwxr-xr-x 71 sum_vals
-rwxr-xr-x 71 tile_seq
-rwxr-xr-x 71 translate_seq
-rwxr-xr-x 71 transliterate_seq
-rwxr-xr-x 71 transliterate_vals
-rwxr-xr-x 71 uniq_vals
-rwxr-xr-x 71 upload_to_ucsc
-rwxr-xr-x 71 uppercase_seq
-rwxr-xr-x 71 vmatch_seq
-rwxr-xr-x 71 write_2bit
-rwxr-xr-x 71 write_align
-rwxr-xr-x 71 write_bed
-rwxr-xr-x 71 write_blast
-rwxr-xr-x 71 write_fasta
-rwxr-xr-x 71 write_psl
-rwxr-xr-x 71 write_solid
-rwxr-xr-x 71 write_tab