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mothur.git
2011-04-06 westcottremoved read.dist, read.otu, read.tree and globaldata... commit | commitdiff | tree | snapshot
2011-04-04 westcottsped up the remove.seqs and remove.lineage and get... commit | commitdiff | tree | snapshot
2011-03-30 westcottfixed problem with sffinfo that caused a file mismatch... commit | commitdiff | tree | snapshot
2011-03-30 pschlossmade dups=T default in get.seqs commit | commitdiff | tree | snapshot
2011-03-29 pschlossremoved some of the warning output from chimera.slayer commit | commitdiff | tree | snapshot
2011-03-23 pschlosssmall mod to chimerarefseq.cpp commit | commitdiff | tree | snapshot
2011-03-22 westcottfixed trim.seqs group counts by adding back in the... commit | commitdiff | tree | snapshot
2011-03-22 westcottworking on pca commit | commitdiff | tree | snapshot
2011-03-22 westcottworking on pca commit | commitdiff | tree | snapshot
2011-03-22 westcottfixed clearcut version bug, added group count output... commit | commitdiff | tree | snapshot
2011-03-22 westcottfixed clearcut version bug, added group count output... commit | commitdiff | tree | snapshot
2011-03-21 pschlossrandom chagnes from pat commit | commitdiff | tree | snapshot
2011-03-21 westcottfixed get.lienage and remove.lineage bug with confidenc... commit | commitdiff | tree | snapshot
2011-03-16 westcottfixed catchall "clunky" names commit | commitdiff | tree | snapshot
2011-03-16 westcottfixed the bug that caused mothur to choke on other... commit | commitdiff | tree | snapshot
2011-03-16 westcottadded set.current and get.current commands and modified... commit | commitdiff | tree | snapshot
2011-03-15 westcottadding current file class commit | commitdiff | tree | snapshot
2011-03-15 westcottadding current file class commit | commitdiff | tree | snapshot
2011-03-11 westcottsped up align.seqs appending of files commit | commitdiff | tree | snapshot
2011-03-11 pschlosssome more mods to shh.seqs commit | commitdiff | tree | snapshot
2011-03-11 westcottadded summary outputs for align.check commit | commitdiff | tree | snapshot
2011-03-11 westcottadded namefile to align.check and added seqs from namef... commit | commitdiff | tree | snapshot
2011-03-11 westcottadded namefile to summary.seqs commit | commitdiff | tree | snapshot
2011-03-11 pschlosssome changes to trim.flows commit | commitdiff | tree | snapshot
2011-03-07 pschlossremoved some couts from qualityscores.cpp commit | commitdiff | tree | snapshot
2011-03-07 pschlossfix trim.seqs / qualscores bug commit | commitdiff | tree | snapshot
2011-03-07 westcotttrim.seqs fix commit | commitdiff | tree | snapshot
2011-03-04 westcottworked on trim.seqs - added in the groupfiles for allfi... commit | commitdiff | tree | snapshot
2011-03-04 westcottworked on trim.seqs - added in the groupfiles for allfi... commit | commitdiff | tree | snapshot
2011-03-04 westcottbug fixes commit | commitdiff | tree | snapshot
2011-03-03 pschlossfixed bug in seqerrorcommand commit | commitdiff | tree | snapshot
2011-03-03 pschlosstook out couts commit | commitdiff | tree | snapshot
2011-03-03 pschlossmodified reportfile class commit | commitdiff | tree | snapshot
2011-03-03 pschlossmodified seqerror and qualscores commit | commitdiff | tree | snapshot
2011-03-03 pschlossmodified seqerror and qualscores commit | commitdiff | tree | snapshot
2011-02-28 westcottfixed unweighted command commit | commitdiff | tree | snapshot
2011-02-26 pschlosssome minor changes commit | commitdiff | tree | snapshot
2011-02-25 westcottchanged version and release date commit | commitdiff | tree | snapshot
2011-02-25 westcottadded root parameter to the unifrac commands so you... commit | commitdiff | tree | snapshot
2011-02-23 westcottfixed bug in unifrac commands with nexus translation... commit | commitdiff | tree | snapshot
2011-02-23 westcottfixed bug in unifrac commands with nexus translation... commit | commitdiff | tree | snapshot
2011-02-23 westcottfixed bug in unifrac commands with unrooted trees commit | commitdiff | tree | snapshot
2011-02-23 westcottfixed bug in unifrac commands with unrooted trees commit | commitdiff | tree | snapshot
2011-02-21 pschlossreworked amova / homova / anosim commit | commitdiff | tree | snapshot
2011-02-18 westcottfixed unifrac bug with multiple processors if numComps... commit | commitdiff | tree | snapshot
2011-02-18 pschlossmods to amova command commit | commitdiff | tree | snapshot
2011-02-16 pschlossbug fix to seq.error commit | commitdiff | tree | snapshot
2011-02-15 westcottfinished anosim command commit | commitdiff | tree | snapshot
2011-02-15 pschlossfixed an mpi bug in shhh.seqs commit | commitdiff | tree | snapshot
2011-02-15 westcottworking on anosim command commit | commitdiff | tree | snapshot
2011-02-15 pschlosstook cout's from shhh.seqs commit | commitdiff | tree | snapshot
2011-02-15 pschlossfixed bugg in shhh.seqs command commit | commitdiff | tree | snapshot
2011-02-15 westcottfinished the chimera.slayer split function commit | commitdiff | tree | snapshot
2011-02-15 westcottfixed mpi version compile issue with chimera.slayer commit | commitdiff | tree | snapshot
2011-02-15 pschlossmods to shhh.seqs command commit | commitdiff | tree | snapshot
2011-02-15 pschlossmods to seq.errror commit | commitdiff | tree | snapshot
2011-02-14 westcottadded make.fastq command commit | commitdiff | tree | snapshot
2011-02-14 westcottfixed catchall PATH variable bug added trimera to chime... commit | commitdiff | tree | snapshot
2011-02-14 pschloss*** empty log message *** commit | commitdiff | tree | snapshot
2011-02-11 pschlossmod to seq.error to allow for degenerate bases in the... commit | commitdiff | tree | snapshot
2011-02-11 pschlossshhh.seqs and trim.flows modifications. commit | commitdiff | tree | snapshot
2011-02-10 pschlossmodified reverse.seqs and qualscores.cpp commit | commitdiff | tree | snapshot
2011-02-09 pschlossmods to trim.seqs commit | commitdiff | tree | snapshot
2011-02-09 pschlossmods to trim.seqs commit | commitdiff | tree | snapshot
2011-02-09 westcottadded mantel command commit | commitdiff | tree | snapshot
2011-02-09 westcottadded mantel command commit | commitdiff | tree | snapshot
2011-02-09 pschlossmods to shhhercommand and seqerrorcommand commit | commitdiff | tree | snapshot
2011-02-08 pschlosschanges to trim.flows command commit | commitdiff | tree | snapshot
2011-02-08 westcottadded [ERROR] flag if command aborts commit | commitdiff | tree | snapshot
2011-02-08 westcottfixed homova command commit | commitdiff | tree | snapshot
2011-02-08 westcottadded homova command commit | commitdiff | tree | snapshot
2011-02-08 westcottadded homova command commit | commitdiff | tree | snapshot
2011-02-08 westcottadded amova command commit | commitdiff | tree | snapshot
2011-02-08 westcottadded amova command commit | commitdiff | tree | snapshot
2011-02-08 westcottadded amova command commit | commitdiff | tree | snapshot
2011-02-07 westcottadding license commit | commitdiff | tree | snapshot
2011-02-04 westcottfixed kendall method in corr.axes commit | commitdiff | tree | snapshot
2011-02-04 westcottworking on kendall commit | commitdiff | tree | snapshot
2011-02-04 pschlossremoved trimera checking from refchimeratest commit | commitdiff | tree | snapshot
2011-02-04 westcottfixed catchall hangup if it can't find the exe commit | commitdiff | tree | snapshot
2011-02-03 westcottcorr.axes spearman commit | commitdiff | tree | snapshot
2011-02-03 westcottchanges for 1.16.0 commit | commitdiff | tree | snapshot
2011-02-03 pschlosstrue chimera testing using reference sequences commit | commitdiff | tree | snapshot
2011-02-03 pschloss*** empty log message *** commit | commitdiff | tree | snapshot
2011-01-26 westcottfixed mempearson and structpearson commit | commitdiff | tree | snapshot
2011-01-26 westcottmods in testing 1.16.0 commit | commitdiff | tree | snapshot
2011-01-25 westcottmods for 1.16 commit | commitdiff | tree | snapshot
2011-01-24 westcottadded merge.groups command commit | commitdiff | tree | snapshot
2011-01-24 westcottadded zscore method to normalize.shared commit | commitdiff | tree | snapshot
2011-01-24 westcottremove.rare command commit | commitdiff | tree | snapshot
2011-01-21 westcottmodified shhhercommand to make buildable with windows commit | commitdiff | tree | snapshot
2011-01-21 westcottadded calcs to tree.shared. working on remove.rare... commit | commitdiff | tree | snapshot
2011-01-21 westcottadded diffs and percent parameters to cluster.fragments... commit | commitdiff | tree | snapshot
2011-01-21 westcottnmds command done commit | commitdiff | tree | snapshot
2011-01-21 westcottworking on nmds commit | commitdiff | tree | snapshot
2011-01-21 westcottworking on nmds commit | commitdiff | tree | snapshot
2011-01-19 westcottworking on nmds command commit | commitdiff | tree | snapshot
2011-01-19 westcottworking on nmds command commit | commitdiff | tree | snapshot
2011-01-14 westcottfixed trim.seqs bug with qtrim parameter and added... commit | commitdiff | tree | snapshot
2011-01-10 westcottpca command commit | commitdiff | tree | snapshot
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Mothur--16S microbiota sequencing software; mirror of main repository with my branches