projects / mothur.git / shortlog
? search:
summary | shortlog | log | commit | commitdiff | tree
first ⋅ prev ⋅ next
mothur.git
2009-05-15 westcottfixed if defined in dist.seqs command commit | commitdiff | tree | snapshot
2009-05-15 westcottfixed memory leak in collect.shared() commit | commitdiff | tree | snapshot
2009-05-15 westcottspeed up rarefaction.shared commit | commitdiff | tree | snapshot
2009-05-15 westcottfixed bug in heatmap commit | commitdiff | tree | snapshot
2009-05-14 westcottfixed memory leak in rarefact commit | commitdiff | tree | snapshot
2009-05-14 westcottfixed bug in venn command commit | commitdiff | tree | snapshot
2009-05-13 westcottchanged name of distance command to dist.seqs commit | commitdiff | tree | snapshot
2009-05-13 westcottchanged all shared commands so that they read the share... commit | commitdiff | tree | snapshot
2009-05-13 westcottfixed bug with getting sharedrabunds for venn, heatmap... commit | commitdiff | tree | snapshot
2009-05-12 westcottadded distance command and filterseqs commit | commitdiff | tree | snapshot
2009-05-08 westcottaltered venn command to make use of sharedchao for... commit | commitdiff | tree | snapshot
2009-05-08 ryabinfilterseqscommand added commit | commitdiff | tree | snapshot
2009-05-07 westcottfixed concensus command and modified tree class so... commit | commitdiff | tree | snapshot
2009-05-04 ryabin*** empty log message *** commit | commitdiff | tree | snapshot
2009-05-04 westcottfixed xp user bug with rarefact commands and cluster... commit | commitdiff | tree | snapshot
2009-05-04 westcottadded concensus command and updated calcs commit | commitdiff | tree | snapshot
2009-05-04 westcottadded concensus command and updated calcs commit | commitdiff | tree | snapshot
2009-05-04 westcottadded concensus command commit | commitdiff | tree | snapshot
2009-04-24 pschlossThis is mothur v 1.2.0 - the April ~24, 2009 release commit | commitdiff | tree | snapshot
2009-04-23 pschlossmore calculator edits and added coverage and whittaker commit | commitdiff | tree | snapshot
2009-04-22 pschlossmodified some calculators and other stuff - pds commit | commitdiff | tree | snapshot
2009-04-22 westcottchanged heatmap and venn command to use vector of share... commit | commitdiff | tree | snapshot
2009-04-21 westcottbroke apart read matrix file commit | commitdiff | tree | snapshot
2009-04-21 westcottfixed bug with get.oturep and fixed problem with errorc... commit | commitdiff | tree | snapshot
2009-04-21 westcottfixed bug with parsimony(groups=all) and unifrac.unweig... commit | commitdiff | tree | snapshot
2009-04-21 westcottfixed bug in venn command which caused error when user... commit | commitdiff | tree | snapshot
2009-04-20 pschlosspds fixes of heatmap and some other minor stuff commit | commitdiff | tree | snapshot
2009-04-17 westcottadded bootstrap.shared command and fixed some bugs... commit | commitdiff | tree | snapshot
2009-04-14 westcottremoved "shared" from some of the calculator names... commit | commitdiff | tree | snapshot
2009-04-14 pschloss*** empty log message *** commit | commitdiff | tree | snapshot
2009-04-14 westcottadded log10 and log2 scalers for heatmap commit | commitdiff | tree | snapshot
2009-04-14 westcottstarted shared utilities, updates to venn and heatmap... commit | commitdiff | tree | snapshot
2009-04-08 westcottfixed bug in read.tree updates help and validparameters... commit | commitdiff | tree | snapshot
2009-04-06 westcottadded get.oturep command commit | commitdiff | tree | snapshot
2009-04-06 westcottfixed memory leak in parsimony calculator and added... commit | commitdiff | tree | snapshot
2009-04-03 westcottvenn command with up to 4 groups using sharedsobs,... commit | commitdiff | tree | snapshot
2009-04-02 westcottvenn command with up to 4 groups commit | commitdiff | tree | snapshot
2009-03-31 westcottstarted venn command commit | commitdiff | tree | snapshot
2009-03-30 ryabinFixed validParameter() method so line parameter can... commit | commitdiff | tree | snapshot
2009-03-30 westcottmade sorting optional but sort by default, in case... commit | commitdiff | tree | snapshot
2009-03-30 westcottadded sort to heatmap to put shared otus at the top... commit | commitdiff | tree | snapshot
2009-03-27 westcottfixed reference issue commit | commitdiff | tree | snapshot
2009-03-27 westcottadded heatmap command commit | commitdiff | tree | snapshot
2009-03-27 westcottadded heatmap command commit | commitdiff | tree | snapshot
2009-03-27 ryabinadded the Calculators Thomas made in the fall. Added... commit | commitdiff | tree | snapshot
2009-03-27 ryabinadded the Calculators Thomas made in the fall. Added... commit | commitdiff | tree | snapshot
2009-03-26 westcottheatmap commit | commitdiff | tree | snapshot
2009-03-25 westcottstarted heatmap command commit | commitdiff | tree | snapshot
2009-03-24 westcottadded sharedbraycurtis, sharedmorisirahorn, sharedkulcz... commit | commitdiff | tree | snapshot
2009-03-23 westcottadded sharedochiai and sharedanderberg calculators commit | commitdiff | tree | snapshot
2009-03-23 westcottfixed libshuff signif. values commit | commitdiff | tree | snapshot
2009-03-23 westcottput back no command and worked on libshuff commit | commitdiff | tree | snapshot
2009-03-20 westcottremoved no command because it is never called now that... commit | commitdiff | tree | snapshot
2009-03-20 westcottdocumentation commit | commitdiff | tree | snapshot
2009-03-19 westcottfixed memory leak globaldata container structures,... commit | commitdiff | tree | snapshot
2009-03-19 westcottfixed memory leak of groupmap in reads commit | commitdiff | tree | snapshot
2009-03-19 westcottupdated errorchecking so it checks if the parameter... commit | commitdiff | tree | snapshot
2009-03-19 westcottlibshuff and updated help to include libshuff and modif... commit | commitdiff | tree | snapshot
2009-03-18 westcottworking on libshuff commit | commitdiff | tree | snapshot
2009-03-16 westcottadded nseqs and sharednseqs calculators, removed excess... commit | commitdiff | tree | snapshot
2009-03-10 westcottworking on libshuff commit | commitdiff | tree | snapshot
2009-03-09 pschlosschanged the ending of the unique fasta sequence file... commit | commitdiff | tree | snapshot
2009-03-09 westcottadded abs() to weighted and unweighted to account for... commit | commitdiff | tree | snapshot
2009-03-09 westcottfixed bug in read.tree commit | commitdiff | tree | snapshot
2009-03-09 westcottfixed bug in summary.shared for groups commit | commitdiff | tree | snapshot
2009-03-09 westcottfixed bug with line and label parameters and added... commit | commitdiff | tree | snapshot
2009-03-09 westcottdeleted read.shared command and added its functionality... commit | commitdiff | tree | snapshot
2009-03-09 westcottadded ability for user to select which groups to analyz... commit | commitdiff | tree | snapshot
2009-03-09 westcottfixed outputs in unifrac to look the same commit | commitdiff | tree | snapshot
2009-03-09 westcottfixed memory issue with cluster command commit | commitdiff | tree | snapshot
2009-03-09 westcottfixed valid parameters to include shared parameter... commit | commitdiff | tree | snapshot
2009-03-07 pschlossmucked around some with the output in the unifrac.weigh... commit | commitdiff | tree | snapshot
2009-03-06 westcottgot rid of rd_parsimony ext. commit | commitdiff | tree | snapshot
2009-03-06 westcottfixed bug wit unifrac files commit | commitdiff | tree | snapshot
2009-03-06 westcottadded full matrix files commit | commitdiff | tree | snapshot
2009-03-06 westcottfixed bug in random option of parsimony() commit | commitdiff | tree | snapshot
2009-03-06 pschlossfixed parsimony bug commit | commitdiff | tree | snapshot
2009-03-06 westcottchanged format of output in unifrac and parsimony files commit | commitdiff | tree | snapshot
2009-03-06 westcottfixed bug in read tree commit | commitdiff | tree | snapshot
2009-03-06 westcottfixed bug in read tree commit | commitdiff | tree | snapshot
2009-03-05 westcottworking on readtree commit | commitdiff | tree | snapshot
2009-03-04 westcottunifrac.weighted commit | commitdiff | tree | snapshot
2009-03-03 westcottparsimony output changed commit | commitdiff | tree | snapshot
2009-03-03 westcottunifrac.unweighted command changes commit | commitdiff | tree | snapshot
2009-03-02 westcottworked on unifrac.unweighted() commit | commitdiff | tree | snapshot
2009-03-02 westcottfixed bug in unweighted commit | commitdiff | tree | snapshot
2009-02-27 westcottfixed parsimony with groups and worked on unifrac.unwei... commit | commitdiff | tree | snapshot
2009-02-26 westcottparsimony with groups commit | commitdiff | tree | snapshot
2009-02-26 westcottparsimony with groups commit | commitdiff | tree | snapshot
2009-02-26 pschlossfix weighted unifrac bug in findIndex and randomize... commit | commitdiff | tree | snapshot
2009-02-26 westcottweightedcommand commit | commitdiff | tree | snapshot
2009-02-24 westcottchanged unifrac.weighted() commit | commitdiff | tree | snapshot
2009-02-24 westcottchanged unifrac.weighted() commit | commitdiff | tree | snapshot
2009-02-24 westcottchanged unifrac.weighted() commit | commitdiff | tree | snapshot
2009-02-24 westcotttest commit | commitdiff | tree | snapshot
2009-02-24 pschlossprint tree debugger commit | commitdiff | tree | snapshot
2009-02-24 westcottparsimony fix commit | commitdiff | tree | snapshot
2009-02-23 westcottfixed parsimony for groups commit | commitdiff | tree | snapshot
2009-02-23 westcottfixed parsimony for groups commit | commitdiff | tree | snapshot
2009-02-23 westcottfixed unweighted calculator commit | commitdiff | tree | snapshot
next
Mothur--16S microbiota sequencing software; mirror of main repository with my branches