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mothur.git
2011-10-26 westcottparalellized chimera.uchime for windows for both by... commit | commitdiff | tree | snapshot
2011-10-24 westcottadded processors to pre.cluster for mac and windows... commit | commitdiff | tree | snapshot
2011-10-18 westcott1.22.0 commit | commitdiff | tree | snapshot
2011-10-18 westcott1.22.0 commit | commitdiff | tree | snapshot
2011-10-18 westcott1.22.0 commit | commitdiff | tree | snapshot
2011-10-11 pschlosscamberra fix commit | commitdiff | tree | snapshot
2011-10-07 westcotttesting 1.22.0 commit | commitdiff | tree | snapshot
2011-10-04 westcottfixed minor issue with sub.sample command. commit | commitdiff | tree | snapshot
2011-10-02 westcottcheck in for trip commit | commitdiff | tree | snapshot
2011-09-23 westcottadded summary.tax command and fixed bug with root level... commit | commitdiff | tree | snapshot
2011-09-21 westcottfinished added bygroup processing of chimeras in chimer... commit | commitdiff | tree | snapshot
2011-09-16 westcottmodified split.groups to use sequenceParser commit | commitdiff | tree | snapshot
2011-09-14 westcottadds group parameter to chimera.uchime so you can check... commit | commitdiff | tree | snapshot
2011-09-13 westcottworking on windows paralellization, added trimOligos... commit | commitdiff | tree | snapshot
2011-08-22 westcottadded multiple processors option for Windows users... commit | commitdiff | tree | snapshot
2011-08-09 westcottadded count.groups command and paralellized align.seqs... commit | commitdiff | tree | snapshot
2011-08-09 westcottadded count.groups command and paralellized align.seqs... commit | commitdiff | tree | snapshot
2011-08-03 westcottadded paralellization for windows to dist.seqs and... commit | commitdiff | tree | snapshot
2011-07-29 westcottremoved UWSig and WSig from output if user does not... commit | commitdiff | tree | snapshot
2011-07-27 westcott1.21.0 commit | commitdiff | tree | snapshot
2011-07-20 westcott1.21.0 commit | commitdiff | tree | snapshot
2011-07-19 westcottadded blastlocation to chimera.slayer and fixed issue... commit | commitdiff | tree | snapshot
2011-07-19 westcottadded shared file type to get.groups and remove.groups commit | commitdiff | tree | snapshot
2011-07-18 westcottchanged normalize.shared and sub.sample commands to... commit | commitdiff | tree | snapshot
2011-07-15 westcottrewrote metastats command in c++, added mothurRemove... commit | commitdiff | tree | snapshot
2011-07-06 westcottadded save parameter to align.seqs, chimera commands... commit | commitdiff | tree | snapshot
2011-07-05 pschlossminor mods to seq.error commit | commitdiff | tree | snapshot
2011-06-29 westcottparalellized the indicator command commit | commitdiff | tree | snapshot
2011-06-28 westcottsmall bug with trimming of quality scores over a window... commit | commitdiff | tree | snapshot
2011-06-28 westcottindicator command commit | commitdiff | tree | snapshot
2011-06-28 pschlosschanged citation for uchime commit | commitdiff | tree | snapshot
2011-06-28 westcottindicator command commit | commitdiff | tree | snapshot
2011-06-21 westcottadded cutoff change to mgcluster commit | commitdiff | tree | snapshot
2011-06-21 westcottadded cutoff change to hcluster commit | commitdiff | tree | snapshot
2011-06-21 westcottdescriptions commit | commitdiff | tree | snapshot
2011-06-20 westcottadded command descriptions commit | commitdiff | tree | snapshot
2011-06-17 westcott1.20.0 commit | commitdiff | tree | snapshot
2011-06-14 pschlosssmall change to shhh.seqs commit | commitdiff | tree | snapshot
2011-06-14 westcottworking on current change commit | commitdiff | tree | snapshot
2011-06-14 westcottworking on current change commit | commitdiff | tree | snapshot
2011-06-13 pschlossremoved some testing changes i made to classify.seqs commit | commitdiff | tree | snapshot
2011-06-09 pschlosstrim.flows mod commit | commitdiff | tree | snapshot
2011-06-09 pschlosssome of pat's small modifications commit | commitdiff | tree | snapshot
2011-06-03 westcottfixed bug with blastdb.cpp commit | commitdiff | tree | snapshot
2011-06-03 westcottfixed bug with blastdb.cpp commit | commitdiff | tree | snapshot
2011-06-01 westcottadded headers to shared and relabund files commit | commitdiff | tree | snapshot
2011-06-01 westcottadded count.seqs command and made some modifcations... commit | commitdiff | tree | snapshot
2011-06-01 westcottadded count.seqs command and made some modifcations... commit | commitdiff | tree | snapshot
2011-05-31 westcottworking on removing pointers from chimera.slayer to... commit | commitdiff | tree | snapshot
2011-05-31 pschlosschanges to beta diversity calculators commit | commitdiff | tree | snapshot
2011-05-27 westcottfinished consensus.seqs cutoff change commit | commitdiff | tree | snapshot
2011-05-27 westcottadded deunique.tree command commit | commitdiff | tree | snapshot
2011-05-27 westcottcaptured stdout from system command, fixed bug in trim... commit | commitdiff | tree | snapshot
2011-05-26 westcottv 19.3 commit | commitdiff | tree | snapshot
2011-05-24 westcottparalellized seq.error and dist.shared added some error... commit | commitdiff | tree | snapshot
2011-05-24 westcottparalellized seq.error and dist.shared added some error... commit | commitdiff | tree | snapshot
2011-05-20 westcottadded path search for lookup file in shhh.seqs commit | commitdiff | tree | snapshot
2011-05-20 pschlossadd lookup files for shhh.seqs commit | commitdiff | tree | snapshot
2011-05-20 westcottchanged blastdb.cpp to no include sequence names in... commit | commitdiff | tree | snapshot
2011-05-20 westcottfinished adding the names option to trim.seqs commit | commitdiff | tree | snapshot
2011-05-18 pschlossmods to shhh.seqs and trim.flows to fix eye candy output commit | commitdiff | tree | snapshot
2011-05-18 westcottadded name option to trim.seqs commit | commitdiff | tree | snapshot
2011-05-18 westcottfixed bug with trim.seqs allfiles=t commit | commitdiff | tree | snapshot
2011-05-18 westcottfixed bug with trim.seqs allfiles=t commit | commitdiff | tree | snapshot
2011-05-18 westcottfixed bug in chimera.uchime commit | commitdiff | tree | snapshot
2011-05-17 westcottadded parameter to chimera.uchime commit | commitdiff | tree | snapshot
2011-05-16 westcottadded chimera.uchime commit | commitdiff | tree | snapshot
2011-05-16 westcottadded chimera.uchime commit | commitdiff | tree | snapshot
2011-05-16 westcottadded chimera.uchime commit | commitdiff | tree | snapshot
2011-05-11 westcottworking on citations commit | commitdiff | tree | snapshot
2011-05-10 westcottadded citation function to commands commit | commitdiff | tree | snapshot
2011-05-10 westcottadded citation function to commands commit | commitdiff | tree | snapshot
2011-05-09 westcott1.19.0 commit | commitdiff | tree | snapshot
2011-05-09 westcott1.19.0 commit | commitdiff | tree | snapshot
2011-05-08 pschlossmore chimera.slayer debugging commit | commitdiff | tree | snapshot
2011-05-06 pschlossadded kmer stuff commit | commitdiff | tree | snapshot
2011-05-06 pschlossmore chimera.slayer stuff commit | commitdiff | tree | snapshot
2011-05-06 pschlossworking on search=dist in chimera.slayer commit | commitdiff | tree | snapshot
2011-05-06 pschlossworking on search=dist in chimera.slayer commit | commitdiff | tree | snapshot
2011-05-06 westcottfixed template=self thing commit | commitdiff | tree | snapshot
2011-05-06 pschlosschimera.slayer debugging commit | commitdiff | tree | snapshot
2011-05-05 pschlosschimera.slayer debugging commit | commitdiff | tree | snapshot
2011-05-05 pschlosschimera.slayer debugging commit | commitdiff | tree | snapshot
2011-05-05 pschlosschanged tags on temp blast db to include template name commit | commitdiff | tree | snapshot
2011-05-05 pschlosschanged tags on temp blast db to include template name commit | commitdiff | tree | snapshot
2011-05-04 westcotttrim.seqs fix of gobble commit | commitdiff | tree | snapshot
2011-05-04 westcottchimera.slayer commit | commitdiff | tree | snapshot
2011-05-04 westcottchimera.slayer commit | commitdiff | tree | snapshot
2011-05-04 westcottchanges for chimera slayer using last column commit | commitdiff | tree | snapshot
2011-05-04 westcottchanges for chimera slayer commit | commitdiff | tree | snapshot
2011-05-04 westcottchanges for chimera slayer commit | commitdiff | tree | snapshot
2011-05-04 westcottchanges for chimera slayer commit | commitdiff | tree | snapshot
2011-05-03 pschlossincorporation of nast-ier code / removed a cout commit | commitdiff | tree | snapshot
2011-05-03 pschlossincorporation of nast-ier code commit | commitdiff | tree | snapshot
2011-05-03 westcottmaligner change commit | commitdiff | tree | snapshot
2011-05-03 westcottfixed id match commit | commitdiff | tree | snapshot
2011-05-03 westcottsped up realign commit | commitdiff | tree | snapshot
2011-05-03 westcottchanged defaults in slayer to minsnp=10 and realign=t commit | commitdiff | tree | snapshot
2011-05-03 westcottfixed bug with realigner for chimera slayer commit | commitdiff | tree | snapshot
2011-05-03 westcottfixed bug with realigner for chimera slayer commit | commitdiff | tree | snapshot
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Mothur--16S microbiota sequencing software; mirror of main repository with my branches