From d70b59e5b332414c544d554dbf54c16d501cc42f Mon Sep 17 00:00:00 2001 From: Heng Li Date: Fri, 2 Oct 2009 12:42:57 +0000 Subject: [PATCH] Clarify the meaning of a region like "chr2:1,000,000". --- samtools.1 | 5 +++-- 1 file changed, 3 insertions(+), 2 deletions(-) diff --git a/samtools.1 b/samtools.1 index dee35ab..77ac869 100644 --- a/samtools.1 +++ b/samtools.1 @@ -123,8 +123,9 @@ is specified, all the alignments will be printed; otherwise only alignments overlapping the specified regions will be output. An alignment may be given multiple times if it is overlapping several regions. A region can be presented, for example, in the following -format: `chr2', `chr2:1000000' or `chr2:1,000,000-2,000,000'. The -coordinate is 1-based. +format: `chr2' (the whole chr2), `chr2:1000000' (region starting from +1,000,000bp) or `chr2:1,000,000-2,000,000' (region between 1,000,000 and +2,000,000bp including the end points). The coordinate is 1-based. .B OPTIONS: .RS -- 2.39.5