From c2881d9159862295233b4895deb8bbebba0fbe99 Mon Sep 17 00:00:00 2001
From: martinahansen <martinahansen@74ccb610-7750-0410-82ae-013aeee3265d>
Date: Thu, 26 May 2011 12:55:58 +0000
Subject: [PATCH] fixed type in assemble_seq_idba

git-svn-id: http://biopieces.googlecode.com/svn/trunk@1434 74ccb610-7750-0410-82ae-013aeee3265d
---
 bp_bin/assemble_seq_idba | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/bp_bin/assemble_seq_idba b/bp_bin/assemble_seq_idba
index cdb6d99..e6a1290 100755
--- a/bp_bin/assemble_seq_idba
+++ b/bp_bin/assemble_seq_idba
@@ -54,7 +54,7 @@ Biopieces.open(options[:stream_in], options[:stream_out]) do |input, output|
 	Fasta.open(file_fasta, mode="w") do |fasta_io|
 		input.each_record do |record|
       if options[:scaffold] # we need to fix the sequence name for mate-pair IDBA
-        if records[:SEQ_NAME] =~ /1$/
+        if record[:SEQ_NAME] =~ /1$/
           record[:SEQ_NAME] = "read#{count}/1"
         else
           record[:SEQ_NAME] = "read#{count}/2"
-- 
2.39.2