From a78ebf80d32299a622d0f27c68403d7cfe789167 Mon Sep 17 00:00:00 2001
From: Don Armstrong <don@donarmstrong.com>
Date: Tue, 23 Jan 2018 13:25:19 -0800
Subject: [PATCH] update resume for modis position

---
 dla-resume.org | 58 ++++++++++++++++++++++++--------------------------
 1 file changed, 28 insertions(+), 30 deletions(-)

diff --git a/dla-resume.org b/dla-resume.org
index fc40f4e..5089c7d 100644
--- a/dla-resume.org
+++ b/dla-resume.org
@@ -7,7 +7,7 @@
 #+LATEX_CLASS_OPTIONS: [10pt,breaklinks]
 
 #+BEGIN_EXPORT latex
-\begin{minipage}[t]{0.4\textwidth}
+\begin{minipage}[t]{0.45\textwidth}
   \begin{minipage}[c][0.6in]{2.3in}
   {\color{headings}\fontsize{24pt}{24pt}\selectfont {\textsc{\textbf{\myauthor}}}}
   {\footnotesize
@@ -38,41 +38,42 @@
 + *PhD* in Cell, Molecular and Developmental Biology
 + *BS* in Biology
 * Skills
-** Genomics and Epigenomics
-+ *NGS* and array-based linkage and association-based mapping of
-  complex phenotypes using DNA sequencing, RNA-seq, Illumina bead
-  arrays, and Affymetrix microarrays from sample collection to
-  publication.
-+ Reproducible, scalable bioinformatics analysis using R, perl,
-  python, make, *nextflow*, and *cwl* based workflows on cloud- and
-  cluster-based systems on terabyte-scale datasets
-+ Alignment, annotation, and variant calling using existing and custom
-  software, including *GATK*, *bwa*, *STAR*, and *kallisto*.
+** Data Science
++ Reproducible, scalable analyses using *R*, *perl*, and python with
+  workflows on cloud- and cluster-based systems on terabyte-scale
+  datasets
 + Experimental design and correction to overcome multiple testing,
   confounders, and batch effects using Bayesian and frequentist
   methods
-** Statistics
-+ Statistical modeling (regression, inference, prediction, and
-  learning in very large (> 1TB) datasets)
-+ Addressing confounders and batch effects
++ Design, development, and deployment of algorithms and data-driven
+  products, including APIs, reports, and interactive web applications
++ Statistical modeling (regression, inference, prediction/forecasting,
+  time series, and machine learning in very large (> 1TB) datasets)
++ Data mining, cleaning, processing and quality assurance of data
+  sources and products using tidydata formalisms
++ Visualization using *R*, ggplot, Shiny, and custom written routines.
+** Software Development
++ Languages: perl, R, C, C++, python, groovy, sh, make
++ Collaborative Development: git, travis, continuous integration,
+  automated testing
++ Web, Mobile: Shiny, jQuery, JavaScript
++ Databases: Postgresql (PL/SQL), SQLite, Mysql, NoSQL
++ Office Software: Gnumeric, Libreoffice, \LaTeX, Word, Excel,
+  Powerpoint
 ** Big Data
 + Parallel and Cloud Computing (slurm, torque, AWS, OpenStack, Azure)
 + Inter-process communication: MPI, OpenMP
 + Filestorage: Gluster, CEFS, GPFS, Lustre
 + Linux system administration
+** Genomics and Epigenomics
++ Linkage and association-based mapping of complex phenotypes using
+  next-generation sequencing and arrays
++ Alignment, annotation, and variant calling using existing and custom
+  software
 ** Mentoring and Leadership
 + Mentored graduate students and Outreachy and Google Summer of Code
   interns
 + Former chair of Debian's Technical Committee
-# + Head developer behind https://bugs.debian.org
-** Software Development
-+ Languages: perl, R, C, C++, python, groovy, sh, make
-+ Collaborative Development: git, travis, continuous integration,
-  automated testing
-+ Web, Mobile: Shiny, jQuery, JavaScript
-+ Databases: Postgresql (PL/SQL), SQLite, Mysql, NoSQL
-+ Office Software: Gnumeric, Libreoffice, \LaTeX, Word, Excel,
-  Powerpoint
 ** Communication
 + Strong written communication skills as evidenced by publication
   record
@@ -88,11 +89,11 @@
 \end{minipage}
   \hfill
    \begin{minipage}[t]{0.0in}
-     % dummy (needed here)
+    % dummy (needed here)
   \end{minipage}
   \medskip
 \hfill
-\begin{minipage}[t]{0.55\textwidth}
+\begin{minipage}[t]{0.5\textwidth}
 
 #+END_EXPORT
 * Experience
@@ -124,11 +125,8 @@
 * Publications and Presentations
 + 24 peer-reviewed publications cited over 1800 times:
   https://dla2.us/pubs
-+ Publication record in GWAS, expression analysis of microarrays, SLE,
-  GBM, epigenetics, comparative evolution of mammals, and lipid
-  membranes
 + H index of 11
-+ Multiple presentations on EWAS of PTSD, genetics of SLE, and Open
++ Numerous invited talks on EWAS of PTSD, genetics of SLE, and Open
   Source: https://dla2.us/pres
 
 * Funding and Awards
-- 
2.39.5