From 9a4d9310d677d1c59dfdd62854fb88184be0d89f Mon Sep 17 00:00:00 2001
From: martinahansen <martinahansen@74ccb610-7750-0410-82ae-013aeee3265d>
Date: Mon, 9 May 2011 09:23:40 +0000
Subject: [PATCH] added fix to find_genes

git-svn-id: http://biopieces.googlecode.com/svn/trunk@1383 74ccb610-7750-0410-82ae-013aeee3265d
---
 bp_bin/find_genes | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/bp_bin/find_genes b/bp_bin/find_genes
index f8fc0e8..16cba9b 100755
--- a/bp_bin/find_genes
+++ b/bp_bin/find_genes
@@ -55,6 +55,10 @@ prodigal = Prodigal.new(infile, outfile, options)
 prodigal.run
 
 prodigal.each do |record|
+  record[:DEFINITION].match /seqhdr="([^"]+)/ do |m| 
+    record[:S_ID] = $1
+  end
+
   bp.puts record
 end
 
-- 
2.39.5