From 7eee95124eb52bee48d75bbbfc5ab5f2720bfe63 Mon Sep 17 00:00:00 2001
From: Derek <derekwbarnett@gmail.com>
Date: Mon, 13 Sep 2010 14:50:05 -0400
Subject: [PATCH] Fixed off-by-one error in BamAlignment::GetEndPosition()

---
 src/api/BamAux.h | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/src/api/BamAux.h b/src/api/BamAux.h
index 2c1c7ac..c8a6585 100644
--- a/src/api/BamAux.h
+++ b/src/api/BamAux.h
@@ -3,7 +3,7 @@
 // Marth Lab, Department of Biology, Boston College
 // All rights reserved.
 // ---------------------------------------------------------------------------
-// Last modified: 10 September 2010 (DB)
+// Last modified: 13 September 2010 (DB)
 // ---------------------------------------------------------------------------
 // Provides the basic constants, data structures, etc. for using BAM files
 // ***************************************************************************
@@ -435,7 +435,7 @@ int BamAlignment::GetEndPosition(bool usePadded) const {
             alignEnd += (*cigarIter).Length;
         }
     }
-    return alignEnd;
+    return alignEnd - 1;
 }
 
 inline
-- 
2.39.2