From 72705084c01a1375ddcfa435c7ce076030ef3a4b Mon Sep 17 00:00:00 2001 From: martinahansen Date: Thu, 24 May 2012 20:49:05 +0000 Subject: [PATCH] fixed ugly bug in trim.rb git-svn-id: http://biopieces.googlecode.com/svn/trunk@1829 74ccb610-7750-0410-82ae-013aeee3265d --- code_ruby/lib/maasha/seq/trim.rb | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/code_ruby/lib/maasha/seq/trim.rb b/code_ruby/lib/maasha/seq/trim.rb index ad8c693..a11159b 100644 --- a/code_ruby/lib/maasha/seq/trim.rb +++ b/code_ruby/lib/maasha/seq/trim.rb @@ -132,7 +132,7 @@ module Trim { c = 0; - while ((c < min_len) && ((c + i) < len) && (qual[len - (c + i) - 1] - score_base > min_qual)) + while ((c < min_len) && ((c + i) < len) && (qual[len - (c + i) - 1] - score_base >= min_qual)) c++; if (c == min_len) @@ -170,7 +170,7 @@ module Trim { c = 0; - while ((c < min_len) && ((c + i) < len) && (qual[c + i] - score_base > min_qual)) + while ((c < min_len) && ((c + i) < len) && (qual[c + i] - score_base >= min_qual)) c++; if (c == min_len) -- 2.39.2