From 33e43317b36c5ac90e6151f1f80b0d3694d66d4f Mon Sep 17 00:00:00 2001 From: Heng Li Date: Tue, 19 Oct 2010 03:40:13 +0000 Subject: [PATCH] added another toy example --- examples/toy.fa | 2 ++ examples/toy.sam | 9 ++++++++- 2 files changed, 10 insertions(+), 1 deletion(-) diff --git a/examples/toy.fa b/examples/toy.fa index 38312c1..afe990a 100644 --- a/examples/toy.fa +++ b/examples/toy.fa @@ -1,2 +1,4 @@ >ref AGCATGTTAGATAAGATAGCTGTGCTAGTAGGCAGTCAGCGCCAT +>ref2 +aggttttataaaacaattaagtctacagagcaactacgcg diff --git a/examples/toy.sam b/examples/toy.sam index baf7388..eae1e2d 100644 --- a/examples/toy.sam +++ b/examples/toy.sam @@ -1,7 +1,14 @@ @SQ SN:ref LN:45 +@SQ SN:ref2 LN:40 r001 163 ref 7 30 8M2I4M1D3M = 37 39 TTAGATAAAGGATACTG * r002 0 ref 9 30 1S2I6M1P1I4M2I * 0 0 AAAAGATAAGGATAAA * r003 0 ref 9 30 5H6M * 0 0 AGCTAA * r004 0 ref 16 30 6M14N1I5M * 0 0 ATAGCTCTCAGC * r003 16 ref 29 30 6H5M * 0 0 TAGGC * -r001 83 ref 37 30 9M = 7 -39 CAGCGCCAT * \ No newline at end of file +r001 83 ref 37 30 9M = 7 -39 CAGCGCCAT * +x1 0 ref2 1 30 20M * 0 0 aggttttataaaacaaataa :::::::::::::::::::: +x2 0 ref2 2 30 21M * 0 0 ggttttataaaacaaataatt ::::::::::::::::::::: +x3 0 ref2 6 30 9M4I13M * 0 0 ttataaaacAAATaattaagtctaca :::::::::::::::::::::::::: +x4 0 ref2 10 30 25M * 0 0 CaaaTaattaagtctacagagcaac ::::::::::::::::::::::::: +x5 0 ref2 12 30 24M * 0 0 aaTaattaagtctacagagcaact :::::::::::::::::::::::: +x6 0 ref2 14 30 23M * 0 0 Taattaagtctacagagcaacta ::::::::::::::::::::::: -- 2.39.5